> Family with sequence similarity 196, member A (FAM196A)
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UGID:2082893     UniGene Hs.613882     Homo sapiens (human)   FAM196A Order cDNA clone, Links
Family with sequence similarity 196, member A (FAM196A)

Human protein-coding gene FAM196A. Represented by 17 ESTs from 10 cDNA libraries. EST representation biased toward uterine tumor. Corresponds to reference sequence NM_001039762.2. [UniGene 2082893 - Hs.613882]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001034851.1 FAM196A gene product H. sapiens 100.0 478
XP_003312870.1 PREDICTED: protein FAM196A P. troglodytes 99.6 478
NP_001137274.1 Fam196a gene product M. musculus 83.8 469
XP_002664078.2 PREDICTED: protein FAM196A-like D. rerio 48.5 482
Other hits (2 of 12) [Show all]SpeciesId(%)Len(aa)
XP_003904454.1 PREDICTED: protein FAM196A isoform 1 P. anubis 97.1 478
XP_001089094.1 PREDICTED: protein FAM196A-like isoform 1 M. mulatta 96.9 478

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: uterine tumor [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uterus; pancreas; lung; placenta; brain; mixed; liver; testis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q26.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AK127465.1 Homo sapiens cDNA FLJ45557 fis, clone BRTHA3002411 P
NM_001039762.2 Homo sapiens family with sequence similarity 196, member A (FAM196A), mRNA PA
BC131825.1 Homo sapiens chromosome 10 open reading frame 141, mRNA (cDNA clone MGC:157760 IMAGE:40128007), complete cds P
BC152483.1 Homo sapiens cDNA clone IMAGE:40128010 P
BC152484.1 Homo sapiens cDNA clone IMAGE:40128011 P
BC137112.1 Homo sapiens chromosome 10 open reading frame 141, mRNA (cDNA clone MGC:168732 IMAGE:9021109), complete cds P
BC144478.1 Homo sapiens chromosome 10 open reading frame 141, mRNA (cDNA clone MGC:178022 IMAGE:9053005), complete cds P

EST sequences (10 of 17) [Show all sequences]

BX090198.1 Clone IMAGp998F234651_;_IMAGE:1897750 lung
AI299803.1 Clone IMAGE:1897750 lung 3' read A
AI301782.1 Clone IMAGE:1897639 lung 3' read A
AI377320.1 Clone IMAGE:2091065 mixed 3' read A
CB996153.1 Clone IMAGE:30338845 placenta 5' read
AW150935.1 Clone IMAGE:2630217 uterus 3' read
CK902877.1 Clone IMAGE:6218694 pancreas 3' read
CK902878.1 Clone IMAGE:6218694 pancreas 5' read
DA399754.1 Clone BRTHA3002411 brain 5' read
DB312081.1 Clone BRTHA3002411 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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