> Laminin, gamma 1 (formerly LAMB2) (LAMC1)
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UGID:2078674     UniGene Hs.609663     Homo sapiens (human)   LAMC1 Links
Laminin, gamma 1 (formerly LAMB2) (LAMC1)

Human protein-coding gene LAMC1. Represented by 648 ESTs from 293 cDNA libraries. Corresponds to reference sequence NM_002293.3. [UniGene 2078674 - Hs.609663]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_002284.3 LAMC1 gene product H. sapiens 100.0 1608
XP_001162648.1 PREDICTED: laminin subunit gamma-1 isoform 3 P. troglodytes 99.8 1608
XP_002808304.1 PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-1-like M. mulatta 99.5 1607
NP_034813.2 Lamc1 gene product M. musculus 95.3 1606
NP_775384.1 lamc1 gene product D. rerio 76.7 1579
NP_509204.2 LAMinin related. See also lmb- family member (lam-2) C. elegans 56.1 1013
NP_524006.1 laminin B2 D. melanogaster 56.0 1054
NP_001106343.1 uncharacterized protein LOC100127305 precursor X. laevis 46.4 308
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
XP_003893466.1 PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-1 P. anubis 99.2 1647
NP_001258644.1 laminin subunit gamma-1 precursor S. scrofa 97.3 1607

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; prostate; brain; amniotic fluid; skin; uncharacterized tissue; adrenal gland; lung; spinal cord; mixed; bladder; placenta; connective tissue; uterus; mammary gland; testis; larynx; intestine; kidney; pancreas; mouth; liver; stomach; bone; ovary; heart; vascular; eye; thyroid; muscle; bone marrow; nerve; ear; esophagus; blood; cervix; epididymis; trachea; ascites; umbilical cord; lymph node; adipose tissue; ganglia; spleen; pituitary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q31
UniSTS entry: Chr 1 D1S3536
UniSTS entry: Chr 1 D1S3330 [Map Viewer]
UniSTS entry: Chr 1 SHGC-75980 [Map Viewer]
UniSTS entry: Chr 1 WI-19021 [Map Viewer]
UniSTS entry: Chr 1 D11S3114
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

NM_002293.3 Homo sapiens laminin, gamma 1 (formerly LAMB2) (LAMC1), mRNA P
BC067813.1 Homo sapiens laminin, gamma 1 (formerly LAMB2), mRNA (cDNA clone IMAGE:30341665), complete cds PA
J03202.1 Human laminin B2 chain mRNA, complete cds P
M27654.1 Human laminin B2 mRNA, 3' end P
X13939.1 Human mRNA fragment for laminin B2 P
BC015586.2 Homo sapiens laminin, gamma 1 (formerly LAMB2), mRNA (cDNA clone IMAGE:4642245), complete cds PA
BC035429.1 Homo sapiens laminin, gamma 1 (formerly LAMB2), mRNA (cDNA clone IMAGE:4148849) A

EST sequences (10 of 648) [Show all sequences]

AA972956.1 Clone IMAGE:1577868 mixed 3' read PA
AA991991.1 Clone IMAGE:1613591 uncharacterized tissue 3' read
AA921777.1 Clone IMAGE:1543464 mixed 3' read PA
AI049762.1 Clone IMAGE:1699840 kidney 3' read A
AI089299.1 Clone IMAGE:1696405 uterus 3' read A
AI091479.1 Clone IMAGE:1566626 mixed 3' read A
AA864922.1 Clone IMAGE:1469529 uncharacterized tissue 3' read A
AI143518.1 Clone IMAGE:1690342 mixed 3' read A
R24171.1 Clone IMAGE:131177 placenta 5' read
R24987.1 Clone IMAGE:35402 brain 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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