> Synapsin III (SYN3)
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UGID:2077761     UniGene Hs.608750     Homo sapiens (human)   SYN3 Order cDNA clone, Links
Synapsin III (SYN3)

Human protein-coding gene SYN3. Represented by 111 ESTs from 24 cDNA libraries. EST representation biased toward glioma. Corresponds to 3 reference sequences (different isoforms). [UniGene 2077761 - Hs.608750]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_003481.3 SYN3 gene product H. sapiens 100.0 579
NP_038750.2 Syn3 gene product M. musculus 94.0 578
NP_001079204.1 synapsin III X. laevis 77.2 579
NP_001119909.1 synapsin-1 D. rerio 62.0 668
NP_731457.2 synapsin, isoform A D. melanogaster 50.2 249
Other hits (2 of 33) [Show all]SpeciesId(%)Len(aa)
XP_515096.3 PREDICTED: synapsin-3 isoform 2 P. troglodytes 99.5 579
NP_001162192.1 synapsin-3 P. anubis 99.1 579

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: glioma [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; uncharacterized tissue; placenta; mixed; lung; embryonic tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
Map position: 22q12.3
UniSTS entry: Chr 22 REN78210
UniSTS entry: Chr 22 REN78212
UniSTS entry: Chr 22 REN80308
UniSTS entry: Chr 22 REN78211
UniSTS entry: Chr 22 ECD09738
UniSTS entry: Chr 22 SYN3__5359
UniSTS entry: Chr 22 REN78237
UniSTS entry: Chr 22 REN79718
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AF046873.1 Homo sapiens synapsin IIIa mRNA, complete cds P
NM_003490.3 Homo sapiens synapsin III (SYN3), transcript variant IIIa, mRNA P
CR456589.1 Homo sapiens SYN3 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.SYN3.V3) P
BC075066.2 Homo sapiens synapsin III, mRNA (cDNA clone MGC:103970 IMAGE:30915375), complete cds P
BC075065.2 Homo sapiens synapsin III, transcript variant IIIa, mRNA (cDNA clone MGC:104132 IMAGE:30915588), complete cds P
AB209684.1 Homo sapiens mRNA for Synapsin-3 variant protein P
BC117460.1 Homo sapiens synapsin III, mRNA (cDNA clone MGC:151069 IMAGE:40126011), complete cds P
DQ655947.2 Homo sapiens clone UGL3c10, mRNA sequence P
NM_133633.2 Homo sapiens synapsin III (SYN3), transcript variant IIIc, mRNA P
AK300171.1 Homo sapiens cDNA FLJ57587 complete cds, highly similar to Synapsin-3 P
NM_001135774.1 Homo sapiens synapsin III (SYN3), transcript variant IIIg, mRNA P
BC143874.1 Homo sapiens synapsin III, mRNA (cDNA clone MGC:177407 IMAGE:9052390), complete cds P

EST sequences (10 of 111) [Show all sequences]

AI024435.1 Clone IMAGE:1641706 testis 3' read P
AI095028.1 Clone IMAGE:1687149 brain 3' read
BX096706.1 Clone IMAGp998I211793_;_IMAGE:730844 testis P
AI217179.1 Clone IMAGE:1753221 testis 3' read P
AI220511.1 Clone IMAGE:1838478 testis 3' read P
CB118158.1 Clone B1T694954-5-G07 brain 5' read
AI278778.1 Clone IMAGE:1911149 lung 3' read
AI359258.1 Clone IMAGE:2013197 brain 3' read
AI361561.1 Clone IMAGE:2014864 brain 3' read
AI369844.1 Clone IMAGE:2017667 brain 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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