> Calcium binding protein 39 (CAB39)
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UGID:2072941     UniGene Hs.603930     Homo sapiens (human)   CAB39 Order cDNA clone, Links
Calcium binding protein 39 (CAB39)

Human protein-coding gene CAB39. Represented by 461 ESTs from 217 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 2072941 - Hs.603930]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001365537.1 PREDICTED: calcium-binding protein 39 M. domestica 100.0 340
XP_002188375.1 PREDICTED: calcium-binding protein 39 T. guttata 100.0 340
XP_003641786.1 PREDICTED: calcium-binding protein 39 G. gallus 100.0 340
XP_003209095.1 PREDICTED: calcium-binding protein 39-like M. gallopavo 100.0 340
XP_001112762.1 PREDICTED: calcium-binding protein 39 M. mulatta 100.0 340
XP_526055.2 PREDICTED: calcium-binding protein 39 P. troglodytes 100.0 340
NP_001124321.1 CAB39 gene product H. sapiens 100.0 340
NP_001039552.1 CAB39 gene product B. taurus 100.0 340
XP_004005043.1 PREDICTED: calcium-binding protein 39 O. aries 100.0 340
XP_002712563.1 PREDICTED: calcium binding protein 39-like O. cuniculus 100.0 340
XP_003908115.1 PREDICTED: calcium-binding protein 39 P. anubis 100.0 327
NP_598542.3 Cab39 gene product M. musculus 99.7 340
XP_003218354.1 PREDICTED: calcium-binding protein 39-like A. carolinensis 99.7 340
XP_534599.2 PREDICTED: calcium-binding protein 39 isoform 1 C. lupus familiaris 99.7 340
XP_001494916.2 PREDICTED: calcium-binding protein 39 E. caballus 99.7 340
XP_003359719.1 PREDICTED: calcium-binding protein 39 isoform 1 S. scrofa 99.7 340
NP_001085141.1 calcium binding protein 39 X. laevis 99.1 340
NP_001002145.1 cab39 gene product D. rerio 96.8 340
NP_524117.1 Mo25, isoform A D. melanogaster 76.4 331
NP_496092.1 Protein MOP-25.2 C. elegans 68.1 332
XP_956015.1 conidiophore development protein hymA N. crassa 58.6 169
XP_001691680.1 predicted protein C. reinhardtii 56.5 338
NP_193460.1 putative MO25-like protein A. thaliana 52.5 305
Other hits (2 of 43) [Show all]SpeciesId(%)Len(aa)
XP_002933394.1 PREDICTED: calcium-binding protein 39-like isoform 1 X. tropicalis 99.1 340
XP_003459566.1 PREDICTED: calcium-binding protein 39 O. niloticus 98.8 340

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; kidney; uncharacterized tissue; testis; mixed; embryonic tissue; lung; mammary gland; thymus; intestine; pancreas; connective tissue; lymph node; adipose tissue; pituitary gland; uterus; stomach; muscle; placenta; skin; thyroid; blood; eye; ovary; parathyroid; vascular; prostate; mouth; bone; pharynx; nerve; bladder; liver; trachea; ascites; lymph; heart; salivary gland; umbilical cord; spleen; cervix
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q37.1
UniSTS entry: Chr 2 A002Q38
UniSTS entry: Chr 2 NIB1194
UniSTS entry: Chr 2 WI-17440 [Map Viewer]
UniSTS entry: Chr 2 D2S1575E
UniSTS entry: Chr 2 RH94102
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AF134480.1 Homo sapiens MO25-like protein mRNA, complete cds P
AK000804.1 Homo sapiens cDNA FLJ20797 fis, clone COL00256, highly similar to AF151824 Homo sapiens CGI-66 protein mRNA PA
NM_016289.3 Homo sapiens calcium binding protein 39 (CAB39), transcript variant 1, mRNA PA
AF113536.1 Homo sapiens MO25 protein mRNA, complete cds PA
AF151824.1 Homo sapiens CGI-66 protein mRNA, complete cds P
AK026335.1 Homo sapiens cDNA: FLJ22682 fis, clone HSI10722 PA
AB073893.1 Homo sapiens primary neuroblastoma cDNA, clone:Nbla03113, full insert sequence P
BC020570.1 Homo sapiens calcium binding protein 39, mRNA (cDNA clone MGC:21631 IMAGE:4397573), complete cds PA
AK292382.1 Homo sapiens cDNA FLJ78295 complete cds, highly similar to Homo sapiens calcium binding protein 39 (CAB39), mRNA P
AK315692.1 Homo sapiens cDNA, FLJ96790, Homo sapiens MO25 protein (MO25), mRNA P
NM_001130850.1 Homo sapiens calcium binding protein 39 (CAB39), transcript variant 3, mRNA PA
NM_001130849.1 Homo sapiens calcium binding protein 39 (CAB39), transcript variant 2, mRNA PA

EST sequences (10 of 461) [Show all sequences]

AA961656.1 Clone IMAGE:1592681 kidney 3' read
AA911191.1 Clone IMAGE:1520374 kidney 3' read A
R19433.1 Clone IMAGE:33575 brain 5' read
R19434.1 Clone IMAGE:33576 brain 5' read
R19435.1 Clone IMAGE:33577 brain 5' read
AI041995.1 Clone IMAGE:1667755 parathyroid 3' read A
AI077343.1 Clone IMAGE:1670748 uncharacterized tissue 3' read A
AI080651.1 Clone IMAGE:1660147 embryonic tissue 3' read A
R21390.1 Clone IMAGE:36093 brain 5' read
AI092284.1 Clone IMAGE:1683341 parathyroid 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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