> Nucleotide-binding oligomerization domain containing 2 (NOD2)
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UGID:2061083     UniGene Hs.592072     Homo sapiens (human)   NOD2 Links
Nucleotide-binding oligomerization domain containing 2 (NOD2)

Human protein-coding gene NOD2. Represented by 17 ESTs from 14 cDNA libraries. Corresponds to reference sequence NM_022162.1. [UniGene 2061083 - Hs.592072]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_071445.1 NOD2 gene product H. sapiens 100.0 1039
NP_665856.2 Nod2 gene product M. musculus 79.6 1012
XP_697924.3 PREDICTED: nucleotide-binding oligomerization domain-containing protein 2 D. rerio 50.9 978
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
NP_001098710.1 NOD2 gene product P. troglodytes 99.3 1039
XP_001084287.1 PREDICTED: nucleotide-binding oligomerization domain-containing protein 2 M. mulatta 96.3 1038

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lung; kidney; placenta; uncharacterized tissue; uterus; intestine; brain; spleen; blood; bladder; skin; muscle; heart
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16q21
UniSTS entry: Chr 16 G67948
UniSTS entry: Chr 16 PMC356064P1
UniSTS entry: Chr 16 G67949
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

AY423901.1 Homo sapiens NOD2 protein (CARD15) mRNA, 5' UTR and partial cds
AY187246.1 Homo sapiens CARD15 isoform 14 (CARD15) mRNA, partial sequence; alternatively spliced P
AY187245.1 Homo sapiens CARD15 isoform 13 (CARD15) mRNA, partial sequence; alternatively spliced P
AY187244.1 Homo sapiens CARD15 isoform 12 (CARD15) mRNA, partial sequence; alternatively spliced P
AY187243.1 Homo sapiens CARD15 isoform 11 (CARD15) mRNA, partial sequence; alternatively spliced P
AY187242.1 Homo sapiens CARD15 isoform 10 (CARD15) mRNA, partial sequence; alternatively spliced P
AY187241.1 Homo sapiens CARD15 isoform 9 (CARD15) mRNA, partial sequence; alternatively spliced P
AY187240.1 Homo sapiens CARD15 isoform 8 (CARD15) mRNA, partial sequence; alternatively spliced P
AY187239.1 Homo sapiens CARD15 isoform 7 (CARD15) mRNA, partial sequence; alternatively spliced P
AY187238.1 Homo sapiens CARD15 isoform 6 (CARD15) mRNA, partial sequence; alternatively spliced
AY187237.1 Homo sapiens CARD15 isoform 5 (CARD15) mRNA, partial sequence; alternatively spliced
AY187236.1 Homo sapiens CARD15 isoform 4 (CARD15) mRNA, partial sequence; alternatively spliced P
AY187235.1 Homo sapiens CARD15 isoform 3 (CARD15) mRNA, partial sequence; alternatively spliced P
AY187234.1 Homo sapiens CARD15 isoform 2 (CARD15) mRNA, partial sequence; alternatively spliced P
AY187233.1 Homo sapiens CARD15 isoform 1 (CARD15) mRNA, partial sequence; alternatively spliced P
AF178930.1 Homo sapiens NOD2 protein (NOD2) mRNA, complete cds P
NM_022162.1 Homo sapiens nucleotide-binding oligomerization domain containing 2 (NOD2), mRNA P
DQ868973.1 Homo sapiens CARD15 (CARD15) mRNA, partial cds P
AK298099.1 Homo sapiens cDNA FLJ59824 complete cds, highly similar to Caspase recruitment domain-containing protein 15 P
HQ204571.1 Homo sapiens NOD2-C2 (NOD2) mRNA, complete cds P

EST sequences (10 of 17) [Show all sequences]

AA910520.1 Clone IMAGE:1517974 uncharacterized tissue 3' read A
AI681116.1 Clone IMAGE:2272395 lung 3' read
AI889000.1 Clone IMAGE:2402978 kidney 3' read A
BX380579.2 Clone CS0DI054YD08 placenta 3' read
BX380580.2 Clone CS0DI054YD08 placenta 5' read P
AW517524.1 Clone IMAGE:2791554 uterus 3' read A
AW845499.1 intestine
BE327441.1 Clone IMAGE:3182739 lung 3' read
DA224866.1 Clone BRAWH3018037 brain 5' read P
DA592843.1 Clone HLUNG2015394 lung 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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