> Basic transcription factor 3 (BTF3)
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UGID:2060779     UniGene Hs.591768     Homo sapiens (human)   BTF3 Order cDNA clone, Links
Basic transcription factor 3 (BTF3)

Human protein-coding gene BTF3. Represented by 1776 ESTs from 480 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2060779 - Hs.591768]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001100404.1 PREDICTED: transcription factor BTF3 isoform 2 M. mulatta 100.0 205
XP_003899848.1 PREDICTED: transcription factor BTF3 P. anubis 100.0 205
XP_517710.1 PREDICTED: transcription factor BTF3 isoform 3 P. troglodytes 100.0 205
NP_001032726.1 BTF3 gene product H. sapiens 100.0 205
NP_001008310.1 Btf3 gene product R. norvegicus 100.0 161
XP_001363294.1 PREDICTED: transcription factor BTF3-like M. domestica 100.0 161
XP_423823.3 PREDICTED: transcription factor BTF3 G. gallus 100.0 161
NP_001239062.1 BTF3 gene product C. lupus familiaris 100.0 161
NP_001231927.1 BTF3 gene product S. scrofa 100.0 161
NP_001020485.1 BTF3 gene product B. taurus 100.0 161
XP_004012469.1 PREDICTED: transcription factor BTF3-like O. aries 100.0 161
XP_002721157.1 PREDICTED: basic transcription factor 3 O. cuniculus 100.0 161
NP_001232169.1 LOC100189990 gene product T. guttata 100.0 153
XP_001504739.1 PREDICTED: transcription factor BTF3-like isoform 1 E. caballus 99.5 205
NP_001070026.1 btf3 gene product D. rerio 99.4 161
NP_001088356.1 basic transcription factor 3 X. laevis 99.4 161
NP_663430.2 Btf3 gene product M. musculus 99.0 203
NP_476853.1 bicaudal, isoform A D. melanogaster 71.4 168
NP_495336.1 Protein ICD-1 C. elegans 71.1 159
NP_177466.1 nascent polypeptide-associated complex subunit beta A. thaliana 56.4 164
XP_001699419.1 transcription factor C. reinhardtii 52.8 162
Other hits (2 of 44) [Show all]SpeciesId(%)Len(aa)
NP_001016697.1 btf3 gene product X. tropicalis 99.4 161
XP_001513188.2 PREDICTED: transcription factor BTF3-like O. anatinus 99.3 148

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: pancreas; brain; lung; uncharacterized tissue; testis; intestine; embryonic tissue; liver; uterus; mixed; placenta; connective tissue; prostate; skin; blood; mammary gland; eye; bone; ascites; mouth; lymph node; pharynx; muscle; bone marrow; stomach; heart; ovary; bladder; cervix; salivary gland; pineal gland; adrenal gland; thymus; vascular; kidney; parathyroid; trachea; amniotic fluid; pituitary gland; lymph; ear; umbilical cord; spleen; nerve; adipose tissue; larynx; ganglia; thyroid; tonsil; esophagus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5q13.2
UniSTS entry: Chr X MARC_7241-7242:996687679:1
UniSTS entry: Chr X G42974
UniSTS entry: Chr 5 RH70088
UniSTS entry: Chr 5 SGC33030 [Map Viewer]
UniSTS entry: Chr 5 STS-N23069 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

BT007120.1 Homo sapiens basic transcription factor 3 mRNA, complete cds P
NM_001207.4 Homo sapiens basic transcription factor 3 (BTF3), transcript variant 2, mRNA PA
NM_001037637.1 Homo sapiens basic transcription factor 3 (BTF3), transcript variant 1, mRNA PA
AK225964.1 Homo sapiens mRNA for Transcription factor BTF3 variant, clone: FCC114C01 PA
BC008062.2 Homo sapiens basic transcription factor 3, mRNA (cDNA clone MGC:2209 IMAGE:2966788), complete cds PA
AK291125.1 Homo sapiens cDNA FLJ76397 complete cds, highly similar to Homo sapiens basic transcription factor 3 (BTF3), mRNA P
AK310919.1 Homo sapiens cDNA, FLJ17961
AB062126.1 Homo sapiens OK/SW-cl.8 mRNA for transcription factor BTF 3, complete cds PA
X74070.1 H.sapiens mRNA for transcription factor BTF 3 P
X53280.1 H.sapiens BTF3a mRNA P

EST sequences (10 of 1776) [Show all sequences]

R16131.1 Clone IMAGE:66502 mixed 3' read A
AA973473.1 Clone IMAGE:1569132 lung 3' read A
AA983150.1 Clone IMAGE:1589906 kidney 3' read A
AA989361.1 Clone IMAGE:1607081 mammary gland 3' read
AA996153.1 Clone IMAGE:1605330 lung 3' read
AI016473.1 Clone IMAGE:1623694 embryonic tissue 3' read A
AA948428.1 Clone IMAGE:1560317 intestine 3' read A
AI034210.1 Clone IMAGE:1646329 parathyroid 3' read P
AI073742.1 Clone IMAGE:1665182 skin 3' read A
AI082367.1 Clone IMAGE:1670945 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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