> DNA cross-link repair 1B (DCLRE1B)
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UGID:2060423     UniGene Hs.591412     Homo sapiens (human)   DCLRE1B Order cDNA clone, Links
DNA cross-link repair 1B (DCLRE1B)

Human protein-coding gene DCLRE1B. Represented by 128 ESTs from 79 cDNA libraries. Corresponds to reference sequence NM_022836.3. [UniGene 2060423 - Hs.591412]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_524804.1 PREDICTED: 5' exonuclease Apollo P. troglodytes 100.0 531
NP_073747.1 DCLRE1B gene product H. sapiens 100.0 531
NP_598626.2 Dclre1b gene product M. musculus 87.1 526
NP_001070751.1 dclre1b gene product D. rerio 63.7 369
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_001110949.1 PREDICTED: DNA cross-link repair 1B protein M. mulatta 97.4 531
XP_003892469.1 PREDICTED: 5' exonuclease Apollo P. anubis 97.4 531

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; spleen; pancreas; prostate; testis; eye; kidney; uncharacterized tissue; muscle; thyroid; mouth; connective tissue; uterus; mixed; liver; blood; placenta; thymus; trachea; lymph; bone; cervix; embryonic tissue; skin; lung; intestine; stomach; mammary gland; vascular
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p13.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

CR936679.1 Homo sapiens mRNA; cDNA DKFZp686C24187 (from clone DKFZp686C24187) PA
AK022872.1 Homo sapiens cDNA FLJ12810 fis, clone NT2RP2002464, weakly similar to DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1 P
AK024060.1 Homo sapiens cDNA FLJ13998 fis, clone Y79AA1002229, weakly similar to DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1 P
NM_022836.3 Homo sapiens DNA cross-link repair 1B (DCLRE1B), mRNA PA
BC011950.1 Homo sapiens, clone IMAGE:3880106, mRNA A
BC029687.1 Homo sapiens DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae), mRNA (cDNA clone MGC:29835 IMAGE:5001181), complete cds PA
AF306693.1 Homo sapiens clone P3r(9) mRNA sequence P
AF306692.1 Homo sapiens clone P1-1a mRNA sequence PA
AF306691.1 Homo sapiens clone P60-1a mRNA sequence PA
AF306690.1 Homo sapiens clone 332-9E mRNA sequence

EST sequences (10 of 128) [Show all sequences]

AI039977.1 Clone IMAGE:1663423 skin 3' read A
BX093070.1 Clone IMAGp998N085289_;_IMAGE:2142919 stomach A
AI270709.1 Clone IMAGE:1962816 intestine 3' read A
AI270720.1 Clone IMAGE:1962817 intestine 3' read A
AI272667.1 Clone IMAGE:1876624 mixed 3' read
AI356858.1 Clone IMAGE:2012372 brain 3' read
AI359623.1 Clone IMAGE:2013767 brain 3' read
AI362230.1 Clone IMAGE:2014942 brain 3' read
AI453819.1 Clone IMAGE:2142919 stomach 3' read
AI669133.1 Clone IMAGE:2312036 prostate 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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