> SLIT and NTRK-like family, member 5 (SLITRK5)
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UGID:2060219     UniGene Hs.591208     Homo sapiens (human)   SLITRK5 Order cDNA clone, Links
SLIT and NTRK-like family, member 5 (SLITRK5)

Human protein-coding gene SLITRK5. Represented by 43 ESTs from 24 cDNA libraries. Corresponds to reference sequence NM_015567.1. [UniGene 2060219 - Hs.591208]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003314232.1 PREDICTED: SLIT and NTRK-like family, member 5 isoform 1 P. troglodytes 100.0 957
NP_056382.1 SLITRK5 gene product H. sapiens 100.0 957
XP_001093404.2 PREDICTED: SLIT and NTRK-like protein 5-like isoform 1 M. mulatta 99.9 957
XP_003914033.1 PREDICTED: SLIT and NTRK-like protein 5 P. anubis 99.8 957
NP_942565.1 Slitrk5 gene product M. musculus 97.9 956
XP_002660379.2 PREDICTED: SLIT and NTRK-like protein 5-like D. rerio 72.6 876
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
XP_849372.1 PREDICTED: SLIT and NTRK-like family, member 5 isoform 3 C. lupus familiaris 99.0 957
XP_001916038.1 PREDICTED: SLIT and NTRK-like family, member 5 E. caballus 98.8 957

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; testis; heart; kidney; prostate; larynx; eye; ear; uncharacterized tissue; lung
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 13
Map position: 13q31.2
UniSTS entry: Chr 13 SHGC-57840
UniSTS entry: Chr 13 RH103976
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AB020725.1 Homo sapiens mRNA for KIAA0918 protein, partial cds P
NM_015567.1 Homo sapiens SLIT and NTRK-like family, member 5 (SLITRK5), mRNA PA
BC098106.1 Homo sapiens SLIT and NTRK-like family, member 5, mRNA (cDNA clone MGC:119722 IMAGE:40012375), complete cds P
BC098287.1 Homo sapiens SLIT and NTRK-like family, member 5, mRNA (cDNA clone MGC:119724 IMAGE:40012379), complete cds P
AK024251.1 Homo sapiens cDNA FLJ14189 fis, clone NT2RP2006184, highly similar to SLIT and NTRK-like protein 5 precursor P
BC103509.1 Homo sapiens SLIT and NTRK-like family, member 5, mRNA (cDNA clone MGC:119725 IMAGE:40012381), complete cds P
BC103497.1 Homo sapiens cDNA clone IMAGE:40012378, containing frame-shift errors P
AK299744.1 Homo sapiens cDNA FLJ58374 complete cds, highly similar to SLIT and NTRK-like protein 5 precursor P

EST sequences (10 of 43) [Show all sequences]

BX118920.1 Clone IMAGp998A10785_;_IMAGE:343569 heart
AW020239.1 Clone IMAGE:2482701 ear 5' read
AW131623.1 Clone IMAGE:2619752 brain 3' read A
AW166061.1 Clone IMAGE:2620946 brain 3' read
AW449813.1 Clone IMAGE:2734788 uncharacterized tissue 3' read A
CN360768.1 embryonic tissue 5' read
DR000981.1 Clone TC124884 brain 5' read
DR003288.1 Clone TC103976 brain 5' read
DR760409.1 Clone IMAGE:7969845 embryonic tissue 5' read P
AU129749.1 Clone NT2RP2006184 testis 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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