> Cytochrome c oxidase assembly homolog 11 (yeast) (COX11)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:2060182     UniGene Hs.591171     Homo sapiens (human)   COX11 Order cDNA clone, Links
Cytochrome c oxidase assembly homolog 11 (yeast) (COX11)

Human protein-coding gene COX11. Represented by 352 ESTs from 182 cDNA libraries. Corresponds to 5 reference sequences (different isoforms). [UniGene 2060182 - Hs.591171]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_004366.1 COX11 gene product H. sapiens 100.0 275
XP_001160768.2 PREDICTED: cytochrome c oxidase assembly protein COX11, mitochondrial-like P. troglodytes 99.6 275
NP_950173.1 cytochrome c oxidase assembly protein COX11, mitochondrial M. musculus 93.5 274
NP_001076427.1 cox11 gene product D. rerio 86.5 214
NP_723086.1 CG31648 D. melanogaster 71.9 228
NP_502547.2 Protein JC8.5 C. elegans 67.9 193
NP_015193.1 Cox11p S. cerevisiae 61.5 218
NP_171743.1 cytochrome c oxidase assembly protein CtaG / Cox11 A. thaliana 57.6 217
XP_956279.1 hypothetical protein NCU01657 N. crassa 50.3 177
XP_001700235.1 cytochrome c oxidase assembly protein C. reinhardtii 49.2 187
Other hits (2 of 55) [Show all]SpeciesId(%)Len(aa)
XP_003912823.1 PREDICTED: cytochrome c oxidase assembly protein COX11, mitochondrial-like isoform 1 P. anubis 96.5 281
NP_001182369.1 COX11 homolog, cytochrome c oxidase assembly protein M. mulatta 95.7 275

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; eye; embryonic tissue; kidney; prostate; lung; liver; cervix; blood; placenta; ear; pancreas; uncharacterized tissue; mixed; intestine; stomach; skin; adrenal gland; testis; bladder; muscle; uterus; vascular; pharynx; heart; lymph node; mammary gland; bone marrow; nerve; parathyroid; ascites; connective tissue; pituitary gland; bone; thyroid; ganglia; thymus; mouth
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q22
UniSTS entry: Chr 6 A004C21 [Map Viewer]
UniSTS entry: Chr 6 RH26130
UniSTS entry: Chr 6 RH39342
UniSTS entry: Chr 17 WI-12416 [Map Viewer]
UniSTS entry: Chr 1 D15S1390
UniSTS entry: Chr 1 G33523
UniSTS entry: Chr 6 TOM1L1__5116
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

AF044321.1 Homo sapiens cytochrome c oxidase assembly protein COX11 (COX11) mRNA, complete cds PA
AK127404.1 Homo sapiens cDNA FLJ45495 fis, clone BRTHA2012189
AK124809.1 Homo sapiens cDNA FLJ42819 fis, clone BRCAN2015464 A
NM_004375.3 Homo sapiens cytochrome c oxidase assembly homolog 11 (yeast) (COX11), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA PA
CR541837.1 Homo sapiens full open reading frame cDNA clone RZPDo834C0932D for gene COX11, COX11 homolog, cytochrome c oxidase assembly protein (yeast); complete cds, without stopcodon P
BC005895.1 Homo sapiens COX11 homolog, cytochrome c oxidase assembly protein (yeast), mRNA (cDNA clone MGC:14469 IMAGE:4282744), complete cds PA
AK293851.1 Homo sapiens cDNA FLJ60452 complete cds, highly similar to Cytochrome c oxidase assembly protein COX11, mitochondrial precursor P
AK295381.1 Homo sapiens cDNA FLJ56729 complete cds, highly similar to Cytochrome c oxidase assembly protein COX11, mitochondrial precursor P
NM_001162862.1 Homo sapiens cytochrome c oxidase assembly homolog 11 (yeast) (COX11), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA PA
NM_001162861.1 Homo sapiens cytochrome c oxidase assembly homolog 11 (yeast) (COX11), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA PA
U79270.1 Human clone 23707 mRNA, partial cds PA
NR_027942.1 Homo sapiens cytochrome c oxidase assembly homolog 11 (yeast) (COX11), transcript variant 5, non-coding RNA PA
NR_027941.1 Homo sapiens cytochrome c oxidase assembly homolog 11 (yeast) (COX11), transcript variant 4, non-coding RNA PA

EST sequences (10 of 352) [Show all sequences]

AI087829.1 Clone IMAGE:1567104 mixed 3' read
AI096602.1 Clone IMAGE:1702999 brain 3' read A
AI125412.1 Clone IMAGE:1737017 testis 3' read
CB044591.1 Clone IMAGE:3217952 intestine 5' read
CB051762.1 Clone IMAGE:3289955 uncharacterized tissue 3' read A
CB051763.1 Clone IMAGE:3289955 uncharacterized tissue 5' read P
CB070374.1 Clone IMAGE:6554320 pancreas 5' read
CB070316.1 Clone IMAGE:6554320 pancreas 3' read
BX104348.1 Clone IMAGp998C13144_;_IMAGE:28259 brain A
AI193602.1 Clone IMAGE:1744407 lung 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help