> Rho GTPase activating protein 11A (ARHGAP11A)
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UGID:2060141     UniGene Hs.591130     Homo sapiens (human)   ARHGAP11A Order cDNA clone, Links
Rho GTPase activating protein 11A (ARHGAP11A)

Human protein-coding gene ARHGAP11A. Represented by 159 ESTs from 103 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2060141 - Hs.591130]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_055598.1 ARHGAP11A gene product H. sapiens 100.0 1022
XP_510272.3 PREDICTED: rho GTPase-activating protein 11A P. troglodytes 99.6 1022
NP_852081.2 rho GTPase-activating protein 11A M. musculus 77.1 986
NP_998481.2 arhgap11a gene product D. rerio 60.5 441
NP_001079630.2 Rho GTPase activating protein 11A, gene 1 X. laevis 57.9 589
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_003900761.1 PREDICTED: rho GTPase-activating protein 11A P. anubis 95.4 1022
XP_001084475.2 PREDICTED: rho GTPase-activating protein 11A isoform 1 M. mulatta 95.0 1022

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; uncharacterized tissue; vascular; lung; brain; connective tissue; bladder; eye; larynx; testis; lymph node; mouth; liver; muscle; placenta; skin; mixed; uterus; kidney; intestine; blood; adrenal gland; lymph; stomach; ascites; pancreas; bone; bone marrow; thymus; prostate; heart; trachea
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 15q13.2
UniSTS entry: Chr 15 RH78987
UniSTS entry: Chr 15 SHGC-35411 [Map Viewer]
UniSTS entry: Chr 15 RH17370
UniSTS entry: Chr 15 RH25252
UniSTS entry: Chr 15 SHGC-37549 [Map Viewer]
UniSTS entry: Chr 15 STS-N90222
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

BC050545.1 Homo sapiens Rho GTPase activating protein 11A, mRNA (cDNA clone IMAGE:5551861) PA
BC063444.1 Homo sapiens Rho GTPase activating protein 11A, mRNA (cDNA clone IMAGE:5502381), complete cds PA
NM_199357.1 Homo sapiens Rho GTPase activating protein 11A (ARHGAP11A), transcript variant 2, mRNA PA
NM_014783.3 Homo sapiens Rho GTPase activating protein 11A (ARHGAP11A), transcript variant 1, mRNA P
AK303025.1 Homo sapiens cDNA FLJ50314 complete cds, highly similar to Homo sapiens Rho GTPase activating protein 11A (ARHGAP11A), transcript variant 1, mRNA PA
AK316437.1 Homo sapiens cDNA, FLJ79336 complete cds, highly similar to Homo sapiens Rho GTPase activating protein 11A (ARHGAP11A), transcript variant 1, mRNA P
D87717.2 Homo sapiens KIAA0013 mRNA, partial cds P
BC039563.2 Homo sapiens Rho GTPase activating protein 11A, mRNA (cDNA clone MGC:8750 IMAGE:3913511), complete cds PA

EST sequences (10 of 159) [Show all sequences]

CB160287.1 Clone L18POOL1n1-15-A03 liver 5' read
CB116462.1 Clone L6ChoCK0-14-H01 liver 5' read P
CB145148.1 Clone L11SNU354s1-10-A09 liver 5' read P
AI525703.1 prostate 5' read P
AI858837.1 Clone IMAGE:2427735 uterus 3' read A
BX344762.2 Clone CS0DL012YA18 uncharacterized tissue 3' read P
BX344763.2 Clone CS0DL012YA18 uncharacterized tissue 5' read P
BX372467.2 Clone CS0DL012YA18 uncharacterized tissue 3' read PA
BX370780.2 Clone CS0DL012YA18 uncharacterized tissue 5' read P
CD242228.1 Clone IMAGE:30382220 vascular 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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