> Translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) (TIMM50)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:2059967     UniGene Hs.590956     Homo sapiens (human)   TIMM50 Order cDNA clone, Links
Translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) (TIMM50)

Human protein-coding gene TIMM50. Represented by 521 ESTs from 165 cDNA libraries. Corresponds to reference sequence NM_001001563.1. [UniGene 2059967 - Hs.590956]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001001563.1 TIMM50 gene product H. sapiens 100.0 455
XP_001138592.1 PREDICTED: mitochondrial import inner membrane translocase subunit TIM50 isoform 5 P. troglodytes 99.8 455
NP_079892.1 Timm50 gene product M. musculus 96.9 352
NP_956959.1 timm50 gene product D. rerio 81.6 368
NP_570027.1 tiny tim 50 D. melanogaster 55.2 315
NP_505722.1 Protein SCPL-4 C. elegans 50.0 264
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
XP_003915564.1 PREDICTED: LOW QUALITY PROTEIN: mitochondrial import inner membrane translocase subunit TIM50 P. anubis 98.9 455
XP_002711494.1 PREDICTED: translocase of inner mitochondrial membrane 50 homolog O. cuniculus 98.9 354

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: pancreas; testis; brain; uncharacterized tissue; skin; lung; embryonic tissue; eye; mixed; placenta; muscle; uterus; liver; ovary; bone; bladder; adrenal gland; mouth; epididymis; prostate; tonsil; mammary gland; pituitary gland; lymph node; connective tissue; cervix; ascites; intestine; lymph; pharynx; thyroid; blood; heart; kidney; bone marrow; stomach; spleen; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19q13.2
UniSTS entry: Chr 19 A007E39
UniSTS entry: Chr 19 RH36472 [Map Viewer]
UniSTS entry: Chr 1 RH80030
UniSTS entry: Chr 1 GDB:631802
UniSTS entry: Chr 1 RH79802
UniSTS entry: Chr 19 RH46041
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

BC050082.1 Homo sapiens translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:5278031), partial cds PA
AY551341.1 Homo sapiens translocase of inner mitochondrial membrane 50-like protein mRNA, complete cds; nuclear gene for mitochondrial product P
NM_001001563.1 Homo sapiens translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) (TIMM50), nuclear gene encoding mitochondrial protein, mRNA P
AY444561.1 Homo sapiens TIM50L mRNA, complete cds P
BC121146.1 Homo sapiens translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae), mRNA (cDNA clone MGC:150482 IMAGE:40121256), complete cds P
BC121147.1 Homo sapiens translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae), mRNA (cDNA clone MGC:150483 IMAGE:40121258), complete cds P
BC009072.1 Homo sapiens translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:3868486), partial cds PA
BC010736.1 Homo sapiens translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:3900630), partial cds PA
AK098197.1 Homo sapiens cDNA FLJ40878 fis, clone UTERU1000093 P
AK097291.1 Homo sapiens cDNA FLJ39972 fis, clone SPLEN2028138

EST sequences (10 of 521) [Show all sequences]

AI042016.1 Clone IMAGE:1667773 parathyroid 3' read PA
R20419.1 Clone IMAGE:32579 brain 5' read P
AI087852.1 Clone IMAGE:1651182 mixed 3' read PA
AI143738.1 Clone IMAGE:1705954 heart 3' read PA
AI146314.1 Clone IMAGE:1685693 brain 3' read PA
AI183741.1 Clone IMAGE:1739192 lung 3' read A
AI191024.1 Clone IMAGE:1739259 lung 3' read A
CB110663.1 Clone L4SNU368-24-D04 liver 5' read P
CB108817.1 Clone L5HLK1-2-D10 liver 5' read P
CB110598.1 Clone L5HLK1-4-F06 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help