> Zinc finger, CCCH-type with G patch domain (ZGPAT)
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UGID:2059879     UniGene Hs.590868     Homo sapiens (human)   ZGPAT Order cDNA clone, Links
Zinc finger, CCCH-type with G patch domain (ZGPAT)

Human protein-coding gene ZGPAT. Represented by 410 ESTs from 192 cDNA libraries. Corresponds to 5 reference sequences (different isoforms). [UniGene 2059879 - Hs.590868]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_115916.3 ZGPAT gene product H. sapiens 100.0 530
XP_525387.3 PREDICTED: zinc finger CCCH-type with G patch domain-containing protein isoform 5 P. troglodytes 100.0 510
NP_001041613.1 Zgpat gene product M. musculus 86.5 510
NP_001088537.1 zinc finger CCCH-type with G patch domain-containing protein X. laevis 62.0 523
NP_956779.1 zgpat gene product D. rerio 58.5 503
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_003904530.1 PREDICTED: zinc finger CCCH-type with G patch domain-containing protein isoform 1 P. anubis 98.8 509
XP_001113808.2 PREDICTED: zinc finger CCCH-type with G patch domain-containing protein-like M. mulatta 98.4 509

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; uncharacterized tissue; spleen; mammary gland; heart; intestine; thyroid; stomach; thymus; placenta; lung; uterus; kidney; ovary; blood; skin; prostate; lymph; eye; lymph node; connective tissue; muscle; liver; trachea; mixed; vascular; esophagus; bladder; pancreas; bone; embryonic tissue; epididymis; ascites; mouth; cervix; salivary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 20
Map position: 20q13.3
UniSTS entry: Chr 20 RH101996
UniSTS entry: Chr 20 RH75350
UniSTS entry: ZGPAT
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

NM_181485.2 Homo sapiens zinc finger, CCCH-type with G patch domain (ZGPAT), transcript variant 3, mRNA PA
AK027878.1 Homo sapiens cDNA FLJ14972 fis, clone THYRO1000715 P
AB058750.3 Homo sapiens KIAA1847 mRNA for KIAA1847 protein, partial cds PA
NM_032527.4 Homo sapiens zinc finger, CCCH-type with G patch domain (ZGPAT), transcript variant 1, mRNA PA
NM_001083113.1 Homo sapiens zinc finger, CCCH-type with G patch domain (ZGPAT), transcript variant 4, mRNA PA
BC127798.1 Homo sapiens cDNA clone IMAGE:40133296
BC019338.1 Homo sapiens zinc finger, CCCH-type with G patch domain, mRNA (cDNA clone MGC:12946 IMAGE:2906985), complete cds PA
AK314726.1 Homo sapiens cDNA, FLJ95586 P
AK307368.1 Homo sapiens cDNA, FLJ97316 P
BC032612.1 Homo sapiens zinc finger, CCCH-type with G patch domain, mRNA (cDNA clone MGC:44880 IMAGE:5555076), complete cds PA
NM_001195654.1 Homo sapiens zinc finger, CCCH-type with G patch domain (ZGPAT), transcript variant 6, mRNA P
NM_001195653.1 Homo sapiens zinc finger, CCCH-type with G patch domain (ZGPAT), transcript variant 5, mRNA P

EST sequences (10 of 410) [Show all sequences]

CB047309.1 Clone IMAGE:3253131 kidney 5' read
CB051245.1 Clone IMAGE:3289362 prostate 3' read PA
BX119272.1 Clone IMAGp998F22353_;_IMAGE:188181 mammary gland A
CB163738.1 Clone L17N670205n1-46-A08 liver 5' read P
CB162103.1 Clone L17N670205n1-17-D07 liver 5' read P
CB162342.1 Clone L17N670205n1-42-E10 liver 5' read P
CB108489.1 Clone L3SNU475-31-C02 liver 5' read
AI245330.1 Clone IMAGE:1870308 kidney 3' read A
AI631923.1 Clone IMAGE:2300308 kidney 3' read A
AI651182.1 Clone IMAGE:2298722 kidney 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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