> Hemicentin 1 (HMCN1)
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UGID:138563     UniGene Hs.58877     Homo sapiens (human)   HMCN1 Links
Hemicentin 1 (HMCN1)

Human protein-coding gene HMCN1. Represented by 84 ESTs from 55 cDNA libraries. Corresponds to reference sequence NM_031935.2. [UniGene 138563 - Hs.58877]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_514061.2 PREDICTED: hemicentin-1 P. troglodytes 99.4 5634
NP_001019891.2 Hmcn1 gene product M. musculus 88.4 5633
NP_001177233.1 hmcn1 gene product D. rerio 68.9 5588
XP_003960989.1 PREDICTED: hemicentin-2-like H. sapiens 45.4 1044
Other hits (2 of 27) [Show all]SpeciesId(%)Len(aa)
XP_003893439.1 PREDICTED: hemicentin-1 P. anubis 97.5 5620
XP_001491560.1 PREDICTED: hemicentin-1 E. caballus 92.3 5634

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mouth; skin; kidney; larynx; mixed; embryonic tissue; intestine; brain; lung; liver; vascular; testis; ear; trachea; placenta; prostate; connective tissue; muscle; ganglia; uterus; bone; stomach; mammary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q25.3-q31.1
UniSTS entry: AB056375
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

NM_031935.2 Homo sapiens hemicentin 1 (HMCN1), mRNA PA
AK027344.1 Homo sapiens cDNA FLJ14438 fis, clone HEMBB1000317, weakly similar to FIBULIN-1, ISOFORM D PRECURSOR P
AJ306906.1 Homo sapiens partial mRNA for fibulin-6 (FIBL-6 gene) P
AF156100.1 Homo sapiens hemicentin mRNA, complete cds P
BC139908.1 Homo sapiens cDNA clone IMAGE:40147545 PA
AK056336.1 Homo sapiens cDNA FLJ31774 fis, clone NT2RI2008050, weakly similar to BASEMENT MEMBRANE-SPECIFIC HEPARAN SULFATE PROTEOGLYCAN CORE PROTEIN PRECURSOR P
AK096452.1 Homo sapiens cDNA FLJ39133 fis, clone NTONG2008522 P
AL833232.1 Homo sapiens mRNA; cDNA DKFZp762L185 (from clone DKFZp762L185) PA
AK056557.1 Homo sapiens cDNA FLJ31995 fis, clone NT2RP7009236, weakly similar to BASEMENT MEMBRANE-SPECIFIC HEPARAN SULFATE PROTEOGLYCAN CORE PROTEIN PRECURSOR P

EST sequences (10 of 84) [Show all sequences]

BX093180.1 Clone IMAGp998O075586_;_IMAGE:2256990 stomach A
AI298034.1 Clone IMAGE:1896829 lung 3' read A
AI679767.1 Clone IMAGE:2256990 stomach 3' read
AI681770.1 Clone IMAGE:2272898 lung 3' read A
CB963433.1 Clone IMAGE:30318572 vascular 5' read P
CB999578.1 Clone IMAGE:30321698 mixed 5' read
CD298627.1 Clone IMAGE:30403059 vascular 5' read
CD356880.1 Clone IMAGE:30404014 vascular 5' read P
CD511728.1 Clone IMAGE:30405316 vascular 5' read P
BX503106.1 Clone DKFZp779O1771 liver 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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