> Syntaxin 18 (STX18)
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UGID:1953702     UniGene Hs.584913     Homo sapiens (human)   STX18 Order cDNA clone, Links
Syntaxin 18 (STX18)

Human protein-coding gene STX18. Represented by 199 ESTs from 117 cDNA libraries. Corresponds to reference sequence NM_016930.2. [UniGene 1953702 - Hs.584913]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001094903.1 PREDICTED: syntaxin-18 M. mulatta 100.0 334
XP_001154387.1 PREDICTED: syntaxin-18 P. troglodytes 100.0 334
NP_058626.1 STX18 gene product H. sapiens 100.0 334
XP_003898515.1 PREDICTED: syntaxin-18 P. anubis 99.7 334
NP_081235.2 Stx18 gene product M. musculus 96.7 333
NP_001089679.2 syntaxin 18 X. laevis 80.3 300
NP_001019596.1 stx18 gene product D. rerio 80.2 313
Other hits (2 of 28) [Show all]SpeciesId(%)Len(aa)
XP_851021.1 PREDICTED: syntaxin-18 isoform 1 C. lupus familiaris 97.9 335
XP_004010040.1 PREDICTED: syntaxin-18 O. aries 97.9 334

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uterus; testis; mixed; mammary gland; lymph node; embryonic tissue; intestine; pancreas; eye; muscle; uncharacterized tissue; prostate; liver; lung; placenta; bone; blood; parathyroid; thymus; skin; kidney; thyroid; mouth; lymph; heart; nerve; connective tissue; ovary; larynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4p16.3-p16.2
UniSTS entry: Chr 4 WI-17747 [Map Viewer]
UniSTS entry: Chr 4 WIAF-2557 [Map Viewer]
UniSTS entry: Chr 4 STX18__5346
UniSTS entry: Chr 4 SGC32134 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

BT007150.1 Homo sapiens syntaxin 18 mRNA, complete cds P
BX647083.1 Homo sapiens mRNA; cDNA DKFZp686O15149 (from clone DKFZp686O15149) A
BC071980.1 Homo sapiens syntaxin 18, mRNA (cDNA clone IMAGE:2961280), with apparent retained intron PA
NM_016930.2 Homo sapiens syntaxin 18 (STX18), mRNA PA
BT020135.1 Homo sapiens syntaxin 18 mRNA, complete cds P
AB028741.1 Homo sapiens mRNA for syntaxin 18, complete cds PA
AY453396.1 Homo sapiens growth-inhibiting protein 9 (GIG9) mRNA, complete cds P
BC014613.2 Homo sapiens syntaxin 18, mRNA (cDNA clone MGC:3333 IMAGE:2960768), complete cds PA
AK310026.1 Homo sapiens cDNA, FLJ17068 P
AL832867.1 Homo sapiens mRNA; cDNA DKFZp667C133 (from clone DKFZp667C133) PA

EST sequences (10 of 199) [Show all sequences]

AA972593.1 Clone IMAGE:1582980 mixed 3' read A
AA903530.1 Clone IMAGE:1518224 uncharacterized tissue 3' read A
AA908721.1 Clone IMAGE:1522204 lung 3' read A
AI167382.1 Clone IMAGE:1682773 parathyroid 3' read
AI185838.1 Clone IMAGE:1740799 lung 3' read A
AI188109.1 Clone IMAGE:1734359 testis 3' read A
R26023.1 Clone IMAGE:132667 placenta 5' read
AI205277.1 Clone IMAGE:1952908 brain 3' read
AI205564.1 Clone IMAGE:1836671 testis 3' read A
CB158507.1 Clone L18POOL1n1-11-A11 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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