> Atlastin GTPase 1 (ATL1)
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UGID:1953694     UniGene Hs.584905     Homo sapiens (human)   ATL1 Order cDNA clone, Links
Atlastin GTPase 1 (ATL1)

Human protein-coding gene ATL1. Represented by 431 ESTs from 126 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 1953694 - Hs.584905]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001101240.1 PREDICTED: atlastin-1-like isoform 6 M. mulatta 100.0 557
XP_001156076.1 PREDICTED: atlastin-1 isoform 7 P. troglodytes 100.0 557
NP_056999.2 ATL1 gene product H. sapiens 100.0 557
XP_003901828.1 PREDICTED: atlastin-1 P. anubis 100.0 474
XP_002718348.1 PREDICTED: atlastin GTPase 1 O. cuniculus 99.8 546
NP_848743.1 Atl1 gene product M. musculus 99.1 557
NP_001139172.1 atlastin-1 D. rerio 87.5 553
NP_001086007.1 atlastin-2 X. laevis 78.6 500
NP_001023493.1 Protein Y54G2A.2, isoform b C. elegans 65.7 487
NP_651274.1 atlastin, isoform A D. melanogaster 65.3 493
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
XP_851462.1 PREDICTED: atlastin-1 isoform 2 C. lupus familiaris 99.5 557
NP_001009831.1 Atl1 gene product R. norvegicus 99.3 557

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; kidney; intestine; uncharacterized tissue; lung; placenta; mouth; adrenal gland; stomach; mammary gland; pancreas; uterus; mixed; eye; liver; embryonic tissue; skin; muscle; nerve; prostate; trachea; thymus; larynx; ascites; connective tissue; ganglia; pineal gland; bone; pituitary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 14
Map position: 14q22.1
UniSTS entry: Chr 14 HSC2BE052 [Map Viewer]
UniSTS entry: Chr 14 RH98833
UniSTS entry: Chr 14 btcn28117
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

NM_181598.3 Homo sapiens atlastin GTPase 1 (ATL1), transcript variant 2, mRNA P
AF131801.1 Homo sapiens clone 25221 mRNA sequence, complete cds PA
AK125161.1 Homo sapiens cDNA FLJ43171 fis, clone FCBBF3006171
CR457153.1 Homo sapiens full open reading frame cDNA clone RZPDo834D0512D for gene SPG3A, spastic paraplegia 3A (autosomal dominant); complete cds, incl. stopcodon P
NM_015915.4 Homo sapiens atlastin GTPase 1 (ATL1), transcript variant 1, mRNA P
AK223436.1 Homo sapiens mRNA for atlastin variant, clone: FCC112A02 PA
BC010708.2 Homo sapiens atlastin GTPase 1, mRNA (cDNA clone MGC:9903 IMAGE:3869877), complete cds PA
AF444143.1 Homo sapiens brain-specific GTP-binding protein mRNA, complete cds P
AK290185.1 Homo sapiens cDNA FLJ76774 complete cds, highly similar to Homo sapiens spastic paraplegia 3A (autosomal dominant) (SPG3A),mRNA P
AK312518.1 Homo sapiens cDNA, FLJ92883 P
AY032844.1 Homo sapiens GTPase mRNA, complete cds PA
NM_001127713.1 Homo sapiens atlastin GTPase 1 (ATL1), transcript variant 3, mRNA P
AL833591.1 Homo sapiens mRNA; cDNA DKFZp686J1364 (from clone DKFZp686J1364) PA

EST sequences (10 of 431) [Show all sequences]

R18397.1 Clone IMAGE:31041 brain 5' read P
R19638.1 Clone IMAGE:34962 brain 5' read P
R20346.1 Clone IMAGE:32916 brain 5' read P
AI147077.1 Clone IMAGE:1509601 mixed 3' read A
CB152783.1 Clone B1T694954-30-G09 brain 5' read P
CB140810.1 Clone L15CKK1-33-C05 liver 5' read P
R39336.1 Clone IMAGE:24399 brain 3' read A
AI366535.1 Clone IMAGE:1955638 brain 3' read P
R51026.1 Clone IMAGE:38747 brain 3' read A
R51133.1 Clone IMAGE:38747 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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