> Serine/arginine-rich splicing factor 2 (SRSF2)
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UGID:1953590     UniGene Hs.584801     Homo sapiens (human)   SRSF2 Order cDNA clone, Links
Serine/arginine-rich splicing factor 2 (SRSF2)

Human protein-coding gene SRSF2. Represented by 3591 ESTs from 535 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 1953590 - Hs.584801]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_035488.1 Srsf2 gene product M. musculus 100.0 220
NP_001009720.1 Srsf2 gene product R. norvegicus 100.0 220
XP_001371367.1 PREDICTED: serine/arginine-rich splicing factor 2-like M. domestica 100.0 220
NP_001177668.1 splicing factor, arginine/serine-rich 2 M. mulatta 100.0 220
XP_003913541.1 PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 P. anubis 100.0 220
NP_001029290.1 SRSF2 gene product P. troglodytes 100.0 220
NP_001182356.1 SRSF2 gene product H. sapiens 100.0 220
XP_003639286.1 PREDICTED: serine/arginine-rich splicing factor 2-like isoform 1 C. lupus familiaris 100.0 220
NP_001070697.1 SRSF2 gene product S. scrofa 100.0 220
NP_001029490.1 SRSF2 gene product B. taurus 100.0 220
XP_001489519.1 PREDICTED: 60S ribosomal protein L31-like E. caballus 100.0 124
XP_004006178.1 PREDICTED: 60S ribosomal protein L31 isoform 1 O. aries 100.0 124
XP_002709965.1 PREDICTED: ribosomal protein L31-like O. cuniculus 100.0 124
XP_001514814.1 PREDICTED: serine/arginine-rich splicing factor 2-like, partial O. anatinus 100.0 119
XP_003217232.1 PREDICTED: serine/arginine-rich splicing factor 2-like A. carolinensis 99.5 220
NP_001001305.1 SRSF2 gene product G. gallus 99.5 220
NP_001080743.1 serine/arginine-rich splicing factor 2 X. laevis 96.3 214
NP_998547.1 srsf2a gene product D. rerio 93.3 224
NP_652612.1 SC35, isoform B D. melanogaster 75.8 193
NP_495013.1 Protein RSP-4, isoform a C. elegans 58.0 194
NP_201225.1 splicing factor, arginine/serine-rich 2 A. thaliana 46.2 223
Other hits (2 of 35) [Show all]SpeciesId(%)Len(aa)
XP_002194754.1 PREDICTED: serine/arginine-rich splicing factor 2 T. guttata 99.1 220
NP_989328.1 srsf2 gene product X. tropicalis 96.8 219

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; thymus; testis; uncharacterized tissue; uterus; intestine; placenta; lung; spleen; embryonic tissue; kidney; prostate; stomach; skin; heart; liver; blood; ovary; connective tissue; mouth; mammary gland; eye; esophagus; pancreas; adrenal gland; mixed; lymph node; ascites; bladder; bone; trachea; lymph; cervix; parathyroid; vascular; bone marrow; thyroid; ear; pituitary gland; muscle; salivary gland; epididymis; nerve; pharynx; ganglia; adipose tissue; tonsil; larynx; umbilical cord
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q25.1
UniSTS entry: Chr 17 D4S2570E [Map Viewer]
UniSTS entry: Chr 17 SHGC-12848 [Map Viewer]
UniSTS entry: SHGC-132110
UniSTS entry: Chr 11 A004Z40 [Map Viewer]
UniSTS entry: D11Wsu175e
UniSTS entry: Chr 2 D2S2662
UniSTS entry: Chr 2 G43290
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

BT007250.1 Homo sapiens splicing factor, arginine/serine-rich 2 mRNA, complete cds P
AK126432.1 Homo sapiens cDNA FLJ44468 fis, clone UTERU2026025, moderately similar to SPLICING FACTOR, ARGININE/SERINE-RICH 2 A
AK124792.1 Homo sapiens cDNA FLJ42802 fis, clone BRCAN2002562, highly similar to Splicing factor, arginine/serine-rich 2 P
AK123712.1 Homo sapiens cDNA FLJ41718 fis, clone HLUNG2013097, highly similar to SPLICING FACTOR, ARGININE/SERINE-RICH 2 P
NM_003016.4 Homo sapiens serine/arginine-rich splicing factor 2 (SRSF2), transcript variant 1, mRNA PA
BC063570.1 Homo sapiens cDNA clone IMAGE:3865015, **** WARNING: chimeric clone **** PA
BC066958.1 Homo sapiens splicing factor, arginine/serine-rich 2, mRNA (cDNA clone MGC:87440 IMAGE:4837392), complete cds PA
BC070086.1 Homo sapiens splicing factor, arginine/serine-rich 2, mRNA (cDNA clone MGC:87441 IMAGE:5296371), complete cds PA
AK223252.1 Homo sapiens mRNA for splicing factor, arginine/serine-rich 2 variant, clone: STM04813 P
M90104.1 Human splicing factor SC35 mRNA, complete cds PA
BC001303.2 Homo sapiens splicing factor, arginine/serine-rich 2, mRNA (cDNA clone MGC:5480 IMAGE:3452024), complete cds PA
BC000339.2 Homo sapiens splicing factor, arginine/serine-rich 2, mRNA (cDNA clone MGC:8562 IMAGE:2822956), complete cds PA
AK098209.1 Homo sapiens cDNA FLJ40890 fis, clone UTERU2001024, highly similar to SPLICING FACTOR, ARGININE/SERINE-RICH 2 P
AK097069.1 Homo sapiens cDNA FLJ39750 fis, clone SMINT2017736, moderately similar to SPLICING FACTOR, ARGININE/SERINE-RICH 2 P
AK093626.1 Homo sapiens cDNA FLJ36307 fis, clone THYMU2004906, moderately similar to SPLICING FACTOR, ARGININE/SERINE-RICH 2 P
AK092489.1 Homo sapiens cDNA FLJ35170 fis, clone PLACE6012942, highly similar to SPLICING FACTOR, ARGININE/SERINE-RICH 2 P
AK297813.1 Homo sapiens cDNA FLJ52570 complete cds, highly similar to Splicing factor, arginine/serine-rich 2 P
X62447.1 H.sapiens PR264 mRNA P
NM_001195427.1 Homo sapiens serine/arginine-rich splicing factor 2 (SRSF2), transcript variant 2, mRNA P
NR_036608.1 Homo sapiens serine/arginine-rich splicing factor 2 (SRSF2), transcript variant 3, non-coding RNA PA

EST sequences (10 of 3591) [Show all sequences]

AA974324.1 Clone IMAGE:1585972 uncharacterized tissue 3' read A
AI000918.1 Clone IMAGE:1610373 mammary gland 3' read A
AI023906.1 Clone IMAGE:1652096 mixed 3' read
AI024838.1 Clone IMAGE:1639704 testis 3' read A
AI026139.1 Clone IMAGE:1647376 parathyroid 3' read A
AI028469.1 Clone IMAGE:1646223 parathyroid 3' read A
AI028471.1 Clone IMAGE:1646227 parathyroid 3' read A
AA929045.1 Clone IMAGE:1560079 intestine 3' read A
AI055939.1 Clone IMAGE:1659190 embryonic tissue 3' read A
AI087885.1 Clone IMAGE:1683058 parathyroid 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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