Chemokine (C-C motif) ligand 21 (CCL21)

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UGID:138430 UniGene Hs.57907 Homo sapiens (human) CCL21

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Chemokine (C-C motif) ligand 21 (CCL21)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_001164119.1	PREDICTED: small inducible cytokine A21 isoform 2	P. troglodytes	100.0	133
NP_002980.1	small inducible cytokine A21 precursor	H. sapiens	100.0	133
NP_075539.1	chemokine (C-C motif) ligand 21c (leucine)	M. musculus	75.9	132

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	mixed; heart; pancreas; intestine; vascular; uncharacterized tissue; lung; lymph node; prostate; kidney; muscle; placenta; uterus; spleen; pharynx; cervix; eye; stomach; adipose tissue; embryonic tissue; liver; thyroid; mammary gland

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	9
Map position:	9p13
UniSTS entry:	Chr 9	PMC270078P1

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AY358887.1	Homo sapiens clone DNA77503 SLC chemokine (UNQ784) mRNA, complete cds	P
NM_002989.2	Homo sapiens chemokine (C-C motif) ligand 21 (CCL21), mRNA	P
CR450326.1	Homo sapiens full open reading frame cDNA clone RZPDo834G081D for gene CCL21, chemokine (C-C motif) ligand 21; complete cds; without stopcodon	P
CR615435.1	full-length cDNA clone CS0DI076YO17 of Placenta Cot 25-normalized of Homo sapiens (human)	P
AK311901.1	Homo sapiens cDNA, FLJ92167, Homo sapiens chemokine (C-C motif) ligand 21 (CCL21), mRNA	P
BC027918.1	Homo sapiens chemokine (C-C motif) ligand 21, mRNA (cDNA clone MGC:34555 IMAGE:5226781), complete cds	PA
U88320.1	Human beta chemokine Exodus-2 mRNA, complete cds	PA
AB002409.1	Homo sapiens CCL21 mRNA for CC chemokine ligand 21, complete cds	P
AF001979.1	Homo sapiens beta chemokine mRNA, complete cds	PA

EST sequences (10 of 137) [Show all sequences]

AA960870.1	Clone IMAGE:1564635	mixed	3' read	A
AA911090.1	Clone IMAGE:1519040	uncharacterized tissue	3' read	PA
AI074571.1	Clone IMAGE:1673202	mixed	3' read	A
AI076827.1	Clone IMAGE:1674050	mixed	3' read	PA
AI092867.1	Clone IMAGE:1692765	heart	3' read	A
AA947867.1	Clone IMAGE:1508512	mixed	3' read	A
AI139297.1	Clone IMAGE:1710540	uterus	3' read	A
AI143228.1	Clone IMAGE:1706046	heart	3' read	A
AI185579.1	Clone IMAGE:1742870	lung	3' read	A
AI253634.1	Clone IMAGE:2032603	prostate	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria