> Family with sequence similarity 20, member B (FAM20B)
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UGID:131730     UniGene Hs.5737     Homo sapiens (human)   FAM20B Links
Family with sequence similarity 20, member B (FAM20B)

Human protein-coding gene FAM20B. Represented by 293 ESTs from 152 cDNA libraries. Corresponds to reference sequence NM_014864.3. [UniGene 131730 - Hs.5737]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_055679.1 FAM20B gene product H. sapiens 100.0 408
XP_001115532.1 PREDICTED: protein FAM20B M. mulatta 99.5 408
XP_003893514.1 PREDICTED: glycosaminoglycan xylosylkinase P. anubis 99.5 408
XP_514027.2 PREDICTED: glycosaminoglycan xylosylkinase P. troglodytes 99.5 408
NP_663388.1 Fam20b gene product M. musculus 98.8 408
NP_001085425.1 family with sequence similarity 20, member B X. laevis 88.0 408
NP_001038283.1 fam20b gene product D. rerio 85.8 408
NP_732884.2 CG31145, isoform A D. melanogaster 50.2 275
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
XP_537175.2 PREDICTED: glycosaminoglycan xylosylkinase C. lupus familiaris 98.8 408
NP_001069653.1 FAM20B gene product B. taurus 98.7 312

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; lung; brain; eye; uterus; uncharacterized tissue; intestine; prostate; testis; heart; trachea; larynx; thyroid; placenta; nerve; salivary gland; pancreas; spleen; adrenal gland; adipose tissue; ear; bone; ovary; pineal gland; lymph node; embryonic tissue; liver; skin; muscle; connective tissue; mouth; kidney; thymus; stomach; mammary gland; cervix; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q25
UniSTS entry: Chr 1 SHGC-75993 [Map Viewer]
UniSTS entry: Chr 1 A006M42
UniSTS entry: Chr 1 A006O17 [Map Viewer]
UniSTS entry: Chr 1 SHGC-75952 [Map Viewer]
UniSTS entry: Chr 1 SHGC-30547 [Map Viewer]
UniSTS entry: Chr 1 D15S1477
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AB007944.1 Homo sapiens mRNA for KIAA0475 protein, partial cds P
BC046441.1 Homo sapiens family with sequence similarity 20, member B, mRNA (cDNA clone MGC:34351 IMAGE:5197154), complete cds PA
BC051794.1 Homo sapiens family with sequence similarity 20, member B, mRNA (cDNA clone MGC:57628 IMAGE:5492043), complete cds PA
NM_014864.3 Homo sapiens family with sequence similarity 20, member B (FAM20B), mRNA PA
AK289989.1 Homo sapiens cDNA FLJ75598 complete cds P
AY044151.1 Homo sapiens 30-lambda immunoglobulin light chain variable region mRNA, partial cds
AB480690.1 Homo sapiens gxk1 mRNA for glycosaminoglycan xylosylkinase, complete cds PA

EST sequences (10 of 293) [Show all sequences]

AA996106.1 Clone IMAGE:1635880 kidney 3' read
AA885861.1 Clone IMAGE:1500391 lung 3' read
AI024805.1 Clone IMAGE:1639340 testis 3' read
AI127819.1 Clone IMAGE:1711724 uterus 3' read A
CB053599.1 Clone IMAGE:3290936 uncharacterized tissue 3' read A
CB053600.1 Clone IMAGE:3290936 uncharacterized tissue 5' read A
AI160448.1 Clone IMAGE:1709056 heart 3' read
BX109909.1 Clone IMAGp998M21137_;_IMAGE:25343 brain A
AI221927.1 Clone IMAGE:1842864 mixed 3' read
CB158019.1 Clone L18POOL1n1-7-B01 liver 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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