| UGID:1845199 UniGene Hs.572212 Homo sapiens (human) MKRN9P |
|
Makorin ring finger protein 9, pseudogene (MKRN9P)
Human pseudo gene MKRN9P. Represented by 6 ESTs from 6 cDNA libraries. Corresponds to reference sequence NR_033410.1. [UniGene 1845199 - Hs.572212]
SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
| Best Hits and Hits from model organisms | Species | Id(%) | Len(aa) |
|
|
PREDICTED: e3 ubiquitin-protein ligase makorin-1 |
M. mulatta |
93.3 |
417 |
|
|
MKRN1 gene product |
H. sapiens |
91.1 |
481 |
|
|
Mkrn1 gene product |
M. musculus |
86.5 |
480 |
|
|
probable E3 ubiquitin-protein ligase makorin-1 |
X. laevis |
63.3 |
379 |
|
|
mkrn1 gene product |
D. rerio |
60.3 |
437 |
|
|
CG5347 |
D. melanogaster |
51.0 |
149 |
| Other hits (2 of 27) [Show all] | Species | Id(%) | Len(aa) |
|
|
PREDICTED: e3 ubiquitin-protein ligase makorin-1 |
E. caballus |
91.6 |
417 |
|
|
PREDICTED: E3 ubiquitin-protein ligase makorin-1 isoform 5 |
P. troglodytes |
91.3 |
481 |
GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
|
EST Profile: | Approximate expression patterns inferred from EST sources. |
|
GEO Profiles: |
Experimental gene expression data (Gene Expression Omnibus). |
|
cDNA Sources: |
liver; brain; testis; skin; mixed |
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
|
Chromosome: |
12 |
|
Map position: |
12q21.32 |
|
UniSTS entry: |
Chr 12 |
RH134570 |
|
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.
mRNA sequences (2)
|
BC067894.1 |
Homo sapiens makorin ring finger protein pseudogene 6, mRNA (cDNA clone IMAGE:5278542) |
PA |
|
NR_033410.1 |
Homo sapiens makorin ring finger protein 9, pseudogene (MKRN9P), non-coding RNA |
PA |
EST sequences (6)
|
DB032313.1 |
Clone TESTI2016714 |
testis |
5' read |
P |
|
DW435840.1 |
|
liver |
|
P |
|
DB486989.1 |
Clone H033015O15 |
brain |
5' read |
|
|
BG768878.1 |
Clone IMAGE:4872878 |
skin |
5' read |
P |
|
BI457939.1 |
Clone IMAGE:5278542 |
brain |
5' read |
P |
|
BI760239.1 |
Clone IMAGE:5185578 |
mixed |
5' read |
P |
Key to Symbols
P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria
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