Chromosome 1 open reading frame 200 (C1orf200)

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UGID:1841582 UniGene Hs.568595 Homo sapiens (human) C1orf200

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Chromosome 1 open reading frame 200 (C1orf200)

Human miscRNA gene C1orf200. Represented by 6 ESTs from 5 cDNA libraries. Corresponds to reference sequence NR_027045.1. [UniGene 1841582 - Hs.568595]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_001160864.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: putative uncharacterized protein C1orf200-like	P. troglodytes	97.6	166
Other hits (		Species	Id(%)	Len(aa)
XP_001099505.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: putative uncharacterized protein C1orf200-like	M. mulatta	92.8	166
XP_003891127.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: putative uncharacterized protein C1orf200-like	P. anubis	91.6	166

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	stomach; pharynx; tonsil; blood; lymph node

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	1
	Map position:	1p36.22

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AK097325.1	Homo sapiens cDNA FLJ40006 fis, clone STOMA2004852	P
BC016063.1	Homo sapiens chromosome 1 open reading frame 200, mRNA (cDNA clone IMAGE:4851105)	PA
BC144613.1	Homo sapiens chromosome 1 open reading frame 200, mRNA (cDNA clone IMAGE:9053144)	P
NR_027045.1	Homo sapiens chromosome 1 open reading frame 200 (C1orf200), non-coding RNA	PA

EST sequences (6)

CD684426.1		pharynx
DA966401.1	Clone STOMA2004852	stomach	5' read	P
DB334521.1	Clone STOMA2004852	stomach	3' read	A
BG759098.1	Clone IMAGE:4851105	tonsil	5' read	P
BI911864.1	Clone IMAGE:5212789	blood	5' read	P
AA827203.1	Clone IMAGE:1335153	lymph node	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria