> Eukaryotic translation initiation factor 3, subunit C (EIF3C)
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UGID:1782863     UniGene Hs.567374     Homo sapiens (human)   EIF3C Order cDNA clone, Links
Eukaryotic translation initiation factor 3, subunit C (EIF3C)

Human protein-coding gene EIF3C. Represented by 2685 ESTs from 422 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 1782863 - Hs.567374]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_002808338.1 PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit C-like M. mulatta 100.0 912
XP_003916782.1 PREDICTED: eukaryotic translation initiation factor 3 subunit C-like isoform 1 P. anubis 100.0 912
NP_001186071.1 EIF3C gene product H. sapiens 100.0 912
XP_510902.2 PREDICTED: eukaryotic translation initiation factor 3 subunit C, partial P. troglodytes 99.7 565
XP_003434869.1 PREDICTED: eukaryotic translation initiation factor 3 subunit C isoform 1 C. lupus familiaris 99.6 912
NP_001029790.1 EIF3CL gene product B. taurus 99.6 911
NP_666312.1 eukaryotic translation initiation factor 3 subunit C M. musculus 98.9 910
NP_001129648.1 eukaryotic translation initiation factor 3 subunit C X. laevis 87.4 925
NP_998628.1 eif3c gene product D. rerio 86.7 916
NP_611242.1 eIF3-S8 D. melanogaster 60.9 873
NP_492638.1 Protein EIF-3.C C. elegans 53.0 642
XP_962952.1 eukaryotic translation initiation factor 3 N. crassa 52.0 369
NP_191174.1 translation initiation factor eIF-3 subunit 8 A. thaliana 50.9 334
XP_001703102.1 eukaryotic initiation factor C. reinhardtii 47.8 333
Other hits (2 of 53) [Show all]SpeciesId(%)Len(aa)
XP_002711923.1 PREDICTED: eukaryotic translation initiation factor 3, subunit C-like O. cuniculus 99.5 912
XP_004020914.1 PREDICTED: eukaryotic translation initiation factor 3 subunit C-like O. aries 99.5 911

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; skin; thymus; lung; embryonic tissue; intestine; uncharacterized tissue; placenta; eye; kidney; mouth; pancreas; uterus; lymph; connective tissue; liver; muscle; blood; prostate; mammary gland; spleen; ovary; trachea; stomach; vascular; ascites; umbilical cord; thyroid; cervix; heart; bone; mixed; bone marrow; ganglia; adrenal gland; nerve; bladder; salivary gland; esophagus; lymph node; tonsil; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p11.2
UniSTS entry: Chr 16 D16S2553E
UniSTS entry: Chr 16 SGC31754 [Map Viewer]
UniSTS entry: RH68423
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (22)

BT007335.1 Homo sapiens eukaryotic translation initiation factor 3, subunit 8, 110kDa mRNA, complete cds P
AK130531.1 Homo sapiens cDNA FLJ27021 fis, clone SLV06146, highly similar to Eukaryotic translation initiation factor 3 subunit 8 P
NM_003752.3 Homo sapiens eukaryotic translation initiation factor 3, subunit C (EIF3C), transcript variant 1, mRNA PA
AK000739.1 Homo sapiens cDNA FLJ20732 fis, clone HEP08682 P
BC071705.1 Homo sapiens eukaryotic translation initiation factor 3, subunit C, mRNA (cDNA clone MGC:87986 IMAGE:5552014), complete cds PA
BC107692.1 Homo sapiens eukaryotic translation initiation factor 3, subunit C, mRNA (cDNA clone IMAGE:4296645), partial cds PA
NM_001037808.1 Homo sapiens eukaryotic translation initiation factor 3, subunit C (EIF3C), transcript variant 2, mRNA PA
BC000533.2 Homo sapiens eukaryotic translation initiation factor 3, subunit C, mRNA (cDNA clone IMAGE:2964655), complete cds PA
AY762099.1 Homo sapiens cell migration-inducing protein 17 mRNA, complete cds PA
AK055366.1 Homo sapiens cDNA FLJ30804 fis, clone FEBRA2001267, highly similar to Eukaryotic translation initiation factor 3 subunit 8 P
BC001571.1 Homo sapiens eukaryotic translation initiation factor 3, subunit C, mRNA (cDNA clone MGC:5500 IMAGE:3452953), complete cds PA
AK292155.1 Homo sapiens cDNA FLJ78287 complete cds, highly similar to Homo sapiens eukaryotic translation initiation factor 3, subunit 8,110kDa (EIF3S8), mRNA P
BC157849.1 Homo sapiens eukaryotic translation initiation factor 3, subunit C, mRNA (cDNA clone MGC:189744 IMAGE:9057068), complete cds P
BC157842.1 Homo sapiens eukaryotic translation initiation factor 3, subunit C-like, mRNA (cDNA clone MGC:189737 IMAGE:9057061), complete cds P
AK301233.1 Homo sapiens cDNA FLJ53378 complete cds, highly similar to Eukaryotic translation initiation factor 3 subunit 8 P
AK301183.1 Homo sapiens cDNA FLJ55450 complete cds, highly similar to Eukaryotic translation initiation factor 3 subunit 8 P
AK293264.1 Homo sapiens cDNA FLJ54488 complete cds, highly similar to Eukaryotic translation initiation factor 3 subunit 8 P
AK299421.1 Homo sapiens cDNA FLJ55750 complete cds, highly similar to Eukaryotic translation initiation factor 3 subunit 8 P
AK304500.1 Homo sapiens cDNA FLJ54404 complete cds, highly similar to Eukaryotic translation initiation factor 3 subunit 8 P
AK303790.1 Homo sapiens cDNA FLJ54400 complete cds, highly similar to Eukaryotic translation initiation factor 3 subunit 8 P
NM_001199142.1 Homo sapiens eukaryotic translation initiation factor 3, subunit C (EIF3C), transcript variant 3, mRNA P
NM_001267574.1 Homo sapiens eukaryotic translation initiation factor 3, subunit C (EIF3C), transcript variant 4, mRNA PA

EST sequences (10 of 2685) [Show all sequences]

T06050.1 Clone HFBDN46 brain P
AA906731.1 Clone IMAGE:1520130 uncharacterized tissue 3' read P
AI125466.1 Clone IMAGE:1737058 testis 3' read PA
AI125475.1 Clone IMAGE:1737059 testis 3' read PA
AI125666.1 Clone IMAGE:1736771 testis 3' read P
CB112911.1 Clone L6ChoCK0-10-A03 liver 5' read P
CB152114.1 Clone B1T694954-18-E09 brain 5' read P
CB153611.1 Clone B1T694954-33-F09 brain 5' read P
CB155232.1 Clone B2N807043-13-H08 brain 5' read P
CB130828.1 Clone L13SNU387-12-H04 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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