> Aconitase 1, soluble (ACO1)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:1782718     UniGene Hs.567229     Homo sapiens (human)   ACO1 Order cDNA clone, Links
Aconitase 1, soluble (ACO1)

Human protein-coding gene ACO1. Represented by 448 ESTs from 219 cDNA libraries. Corresponds to reference sequence NM_002197.2. [UniGene 1782718 - Hs.567229]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001156102.1 PREDICTED: cytoplasmic aconitate hydratase isoform 4 P. troglodytes 100.0 888
NP_002188.1 ACO1 gene product H. sapiens 100.0 888
XP_001103761.1 PREDICTED: cytoplasmic aconitate hydratase isoform 2 M. mulatta 99.8 888
XP_003911667.1 PREDICTED: cytoplasmic aconitate hydratase P. anubis 99.8 888
NP_031412.2 Aco1 gene product M. musculus 95.8 888
NP_001080577.1 aconitase 1, soluble X. laevis 89.3 889
NP_001030155.1 aco1 gene product D. rerio 88.1 889
NP_524303.2 iron regulatory protein 1B D. melanogaster 76.6 894
NP_509898.1 Protein ACO-1 C. elegans 73.2 868
NP_195308.1 aconitate hydratase 1 A. thaliana 68.5 893
Other hits (2 of 50) [Show all]SpeciesId(%)Len(aa)
XP_001497856.2 PREDICTED: cytoplasmic aconitate hydratase E. caballus 97.2 852
XP_003357777.1 PREDICTED: cytoplasmic aconitate hydratase S. scrofa 96.8 888

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; lung; mixed; uterus; kidney; placenta; trachea; cervix; adipose tissue; intestine; connective tissue; mammary gland; eye; liver; uncharacterized tissue; embryonic tissue; skin; thyroid; adrenal gland; thymus; prostate; blood; stomach; vascular; heart; muscle; pancreas; ascites; mouth; bone; amniotic fluid; lymph; ovary; spleen; nerve; ganglia; pineal gland; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9p21.1
UniSTS entry: Chr 9 RH70753
UniSTS entry: Chr 9 D9S1955 [Map Viewer]
UniSTS entry: Chr 9 WI-21068 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BX538349.1 Homo sapiens mRNA; cDNA DKFZp686P10119 (from clone DKFZp686P10119) PA
NM_002197.2 Homo sapiens aconitase 1, soluble (ACO1), mRNA PA
AB209480.1 Homo sapiens mRNA for aconitase 1 variant protein P
AF261088.1 Homo sapiens iron regulatory protein 1 (IRP1) mRNA, complete cds PA
AK057904.1 Homo sapiens cDNA FLJ25175 fis, clone CBR08906, highly similar to IRON-RESPONSIVE ELEMENT BINDING PROTEIN 1 P
BC018103.1 Homo sapiens aconitase 1, soluble, mRNA (cDNA clone MGC:8709 IMAGE:3915517), complete cds PA
AK308752.1 Homo sapiens cDNA, FLJ98793 P
Z11559.1 H.sapiens mRNA for iron regulatory factor P
M58510.1 Human iron-responsive element-binding protein/iron regulatory protein 1 (IRE-BP1/IRP1) mRNA, partial cds P

EST sequences (10 of 448) [Show all sequences]

AI127153.1 Clone IMAGE:1708196 heart 3' read
BX102388.1 Clone IMAGp998F06128_;_IMAGE:126725 mixed P
AI168066.1 Clone IMAGE:1682483 skin 3' read A
AI168068.1 Clone IMAGE:1682487 skin 3' read A
CB163622.1 Clone L17N670205n1-25-F03 liver 5' read P
CB164755.1 Clone L17N670205n1-13-B11 liver 5' read P
CB115318.1 Clone L3SNU475s1-10-E03 liver 5' read P
CB114185.1 Clone L3SNU475s1-8-F02 liver 5' read P
CB131305.1 Clone L13SNU387-5-C04 liver 5' read P
CB148539.1 Clone L15CKK1-42-A07 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help