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UGID:1780341     UniGene Hs.564847     Homo sapiens (human)   SNRPN Order cDNA clone, Links
Small nuclear ribonucleoprotein polypeptide N (SNRPN)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_523182.2 PREDICTED: hypothetical protein P. troglodytes 100.0 273
XP_001106970.1 PREDICTED: similar to small nuclear ribonucleoparticle-associated protein isoform 2 M. mulatta 100.0 242
NP_001076430.1 small nuclear ribonucleoprotein N M. musculus 100.0 239
NP_112379.1 small nuclear ribonucleoparticle-associated protein R. norvegicus 100.0 239
NP_073716.1 small nuclear ribonucleoprotein polypeptide N H. sapiens 100.0 239
XP_536165.1 PREDICTED: similar to small nuclear ribonucleoparticle-associated protein isoform 4 C. lupus familiaris 100.0 239
XP_001492752.1 PREDICTED: similar to small nuclear ribonucleoprotein polypeptide N E. caballus 100.0 239
NP_001076183.1 SNRPN upstream reading frame O. cuniculus 100.0 70
NP_001073265.1 small nuclear ribonucleoprotein polypeptide N B. taurus 99.6 239
NP_991230.1 small nuclear ribonucleoprotein polypeptides B and B1 D. rerio 96.6 236
NP_001080161.1 small nuclear ribonucleoparticle-associated protein (snRNP) mRNA, clone Sm51 X. laevis 95.8 235
NP_476921.1 small ribonucleoprotein particle protein B D. melanogaster 73.7 198
NP_493348.1 Small Nuclear Ribonucleoprotein family member (snr-2) C. elegans 62.3 159
NP_193777.1 smB (small nuclear ribonucleoprotein associated protein B) A. thaliana 59.8 249

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; pancreas; uncharacterized tissue; testis; eye; lung; prostate; mixed; skin; uterus; muscle; nerve; ovary; kidney; liver; blood; thyroid; bone marrow; spinal cord; pituitary gland; mouth; heart; intestine; trachea; thymus; connective tissue; pineal gland; lymph node; mammary gland; bone; placenta; vascular; pharynx; spleen; larynx; adrenal gland; bladder; tonsil; salivary gland; lymph; ganglia; ear; umbilical cord; cervix; stomach; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 15q11.2
UniSTS entry: (n/a)
UniSTS entry: GDB:626138
UniSTS entry: Chr 15 RH91324
UniSTS entry: Chr 15 SHGC-31492
UniSTS entry: Chr 15 G31495
UniSTS entry: Chr 15 RH70205
UniSTS entry: Chr 2 D11S2921
UniSTS entry: Chr 2 D10S16
UniSTS entry: Chr 2 GDB:434012
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (44)

J04615.1 Human lupus autoantigen (small nuclear ribonuclepoprotein, snRNP, SM-D) mRNA, complete cds P
AK123119.1 Homo sapiens cDNA FLJ41124 fis, clone BRACE2014850, highly similar to Small nuclear ribonucleoprotein-associated protein N P
NM_003097.3 Homo sapiens small nuclear ribonucleoprotein polypeptide N (SNRPN), transcript variant 1, mRNA P
NM_005678.3 Homo sapiens SNRPN upstream reading frame (SNURF), transcript variant 1, mRNA P
CR450350.1 Homo sapiens full open reading frame cDNA clone RZPDo834H032D for gene SNRPN, small nuclear ribonucleoprotein polypeptide N; complete cds; without stopcodon P
CR623042.1 full-length cDNA clone CS0DJ014YB05 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
CR620079.1 full-length cDNA clone CS0DJ014YM05 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
CR604539.1 full-length cDNA clone CS0DC024YJ17 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
CR599902.1 full-length cDNA clone CL0BB013ZB11 of Neuroblastoma of Homo sapiens (human) P
CR599234.1 full-length cDNA clone CS0DN004YH04 of Adult brain of Homo sapiens (human) P
CR597560.1 full-length cDNA clone CS0DL005YE10 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) P
CR595630.1 full-length cDNA clone CS0DI042YA24 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR594630.1 full-length cDNA clone CS0DB003YN23 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) P
CR593899.1 full-length cDNA clone CS0DJ015YN06 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) P
CR593721.1 full-length cDNA clone CS0DF031YP16 of Fetal brain of Homo sapiens (human) P
CR593346.1 full-length cDNA clone CS0DI039YP06 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR591152.1 full-length cDNA clone CS0DM008YO19 of Fetal liver of Homo sapiens (human) P
AF101044.1 Homo sapiens SNRPN upstream reading frame protein (SNURF) mRNA, complete cds P
L80004.1 Homo sapiens u1A-IC/SNRPN transcript, mRNA sequence P
L80005.1 Homo sapiens u1B-IC/SNRPN transcript, mRNA sequence P
AK222633.1 Homo sapiens mRNA for small nuclear ribonucleoprotein polypeptide N variant, clone: CBL04839 PA
U41303.1 Human small nuclear ribonuleoprotein particle N (SNRPN) mRNA, complete cds P
NM_022804.2 Homo sapiens SNRPN upstream reading frame (SNURF), transcript variant 2, mRNA PA
NM_022808.2 Homo sapiens small nuclear ribonucleoprotein polypeptide N (SNRPN), transcript variant 5, mRNA PA
NM_022807.2 Homo sapiens small nuclear ribonucleoprotein polypeptide N (SNRPN), transcript variant 4, mRNA PA
NM_022806.2 Homo sapiens small nuclear ribonucleoprotein polypeptide N (SNRPN), transcript variant 3, mRNA PA
NM_022805.2 Homo sapiens small nuclear ribonucleoprotein polypeptide N (SNRPN), transcript variant 2, mRNA PA
BC000611.2 Homo sapiens small nuclear ribonucleoprotein polypeptide N, mRNA (cDNA clone MGC:1613 IMAGE:3347412), complete cds PA
BC003180.1 Homo sapiens small nuclear ribonucleoprotein polypeptide N, mRNA (cDNA clone MGC:4420 IMAGE:2958068), complete cds PA
AF319524.1 Homo sapiens clone DKFZp762N022 mRNA, complete sequence A
AF319523.1 Homo sapiens RT-LI mRNA, complete sequence P
AF319522.1 Homo sapiens RT-LII mRNA, complete sequence P
AF400432.1 Homo sapiens small nuclear ribonucleoprotein polypeptide N (SNRPN) mRNA, complete cds P
X15892.1 Human hcerN3 gene mRNA for N snRNP associated protein P
BC025178.1 Homo sapiens small nuclear ribonucleoprotein polypeptide N, mRNA (cDNA clone MGC:34180 IMAGE:4158469), complete cds PA
AK098563.1 Homo sapiens cDNA FLJ25697 fis, clone TST04565, highly similar to SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN N P
AL832250.1 Homo sapiens mRNA; cDNA DKFZp667A2417 (from clone DKFZp667A2417) A
BC024777.1 Homo sapiens small nuclear ribonucleoprotein polypeptide N, mRNA (cDNA clone MGC:29886 IMAGE:3907606), complete cds PA
AF400485.1 Homo sapiens clone RT-2I SNURF-SNRPN mRNA, downstream untranslated exons, alternatively spliced
BC018809.2 Homo sapiens cDNA clone IMAGE:2820501 PA
AF092911.1 Homo sapiens small nuclear ribonucleoprotein N (SNRPN) gene, partial 5' UTR sequence
BC035280.1 Homo sapiens, small nuclear ribonucleoprotein polypeptide N, clone IMAGE:5179670, mRNA PA
U81001.1 Human SNRPN mRNA, 3' UTR, partial sequence
X16163.1 Human mRNA for SmB/B' autoimmune antigene (K5-1) P

EST sequences (10 of 1145) [Show all sequences]

AA971122.1 Clone IMAGE:1575375 kidney 3' read P
AA984592.1 Clone IMAGE:1630293 brain 3' read P
AI017249.1 Clone IMAGE:1636276 kidney 3' read PA
AI039757.1 Clone IMAGE:1657341 embryonic tissue 3' read
T27005.1 Clone LLAB102E07 brain 3' read PA
T27006.1 Clone LLAB102E07 brain 5' read P
AI051494.1 Clone IMAGE:1659051 embryonic tissue 3' read A
AI138423.1 Clone IMAGE:1736165 testis 3' read A
AI139263.1 Clone IMAGE:1710101 heart 3' read P
CB069302.1 Clone IMAGE:6364801 pancreas 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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