> Zinc finger, DHHC-type containing 20 (ZDHHC20)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:1780107     UniGene Hs.564611     Homo sapiens (human)   ZDHHC20 Order cDNA clone, Links
Zinc finger, DHHC-type containing 20 (ZDHHC20)

Human protein-coding gene ZDHHC20. Represented by 273 ESTs from 148 cDNA libraries. Corresponds to reference sequence NM_153251.3. [UniGene 1780107 - Hs.564611]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_509571.3 PREDICTED: probable palmitoyltransferase ZDHHC20 P. troglodytes 100.0 353
NP_694983.2 ZDHHC20 gene product H. sapiens 100.0 353
XP_001089163.1 PREDICTED: probable palmitoyltransferase ZDHHC20-like M. mulatta 99.7 353
XP_003913712.1 PREDICTED: probable palmitoyltransferase ZDHHC20 P. anubis 99.7 353
NP_083768.4 Zdhhc20 gene product M. musculus 92.4 367
NP_001084983.1 uncharacterized protein LOC432043 X. laevis 80.7 361
XP_001341243.2 PREDICTED: probable palmitoyltransferase ZDHHC20-like D. rerio 74.4 351
NP_610544.1 CG1407, isoform B D. melanogaster 57.0 295
NP_001255040.1 Protein DHHC-4, isoform d C. elegans 52.4 210
Other hits (2 of 36) [Show all]SpeciesId(%)Len(aa)
XP_543171.3 PREDICTED: probable palmitoyltransferase ZDHHC20 isoform 2 C. lupus familiaris 96.4 364
XP_001489637.3 PREDICTED: probable palmitoyltransferase ZDHHC20-like E. caballus 94.5 291

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; thyroid; connective tissue; cervix; testis; bladder; adrenal gland; eye; uterus; adipose tissue; embryonic tissue; pancreas; intestine; mixed; lung; uncharacterized tissue; vascular; muscle; lymph node; mammary gland; bone marrow; kidney; skin; ovary; blood; thymus; trachea; liver; mouth; prostate; bone; heart; ear; ascites; parathyroid; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 13
Map position: 13q12.11
UniSTS entry: Chr 13 RH11201 [Map Viewer]
UniSTS entry: RH69325
UniSTS entry: Chr 1 D11S2921
UniSTS entry: Chr 1 GDB:631813
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

BC050367.1 Homo sapiens zinc finger, DHHC-type containing 20, mRNA (cDNA clone MGC:51816 IMAGE:5591379), complete cds PA
AK090979.1 Homo sapiens cDNA FLJ33660 fis, clone BRAMY2026395
AL833626.1 Homo sapiens mRNA; cDNA DKFZp686M1273 (from clone DKFZp686M1273) A
AK299354.1 Homo sapiens cDNA FLJ60835 complete cds, highly similar to Probable palmitoyltransferase ZDHHC20 (EC 2.3.1.-) P
BC037336.1 Homo sapiens zinc finger, DHHC-type containing 20, mRNA (cDNA clone IMAGE:5264921) A
BC036691.1 Homo sapiens zinc finger, DHHC-type containing 20, mRNA (cDNA clone IMAGE:5261439) A
BC034944.1 Homo sapiens zinc finger, DHHC-type containing 20, mRNA (cDNA clone IMAGE:4824131), complete cds PA
NM_153251.3 Homo sapiens zinc finger, DHHC-type containing 20 (ZDHHC20), mRNA PA

EST sequences (10 of 273) [Show all sequences]

AI076728.1 Clone IMAGE:1676392 embryonic tissue 3' read A
AI092615.1 Clone IMAGE:1688729 mixed 3' read A
BX112002.1 Clone IMAGp998H08616_;_IMAGE:278839 brain
AI191266.1 Clone IMAGE:1741709 lung 3' read A
AI193627.1 Clone IMAGE:1744437 lung 3' read A
AI218573.1 Clone IMAGE:1845145 mixed 3' read A
R28357.1 Clone IMAGE:133648 placenta 3' read A
R28561.1 Clone IMAGE:133648 placenta 5' read
CB116846.1 Clone L6ChoCK0-17-E02 liver 5' read
CB155336.1 Clone B2N807043-5-E02 brain 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help