> FMR1 antisense RNA 1 (FMR1-AS1)
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UGID:1777548     UniGene Hs.561999     Homo sapiens (human)   FMR1-AS1 Links
FMR1 antisense RNA 1 (FMR1-AS1)

Human miscRNA gene FMR1-AS1. Represented by 5 ESTs from 4 cDNA libraries. Corresponds to 5 reference sequences (different isoforms). [UniGene 1777548 - Hs.561999]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001087617.2 PREDICTED: fragile X mental retardation protein 1 homolog isoform 2 M. mulatta 88.3 111
Other hits (SpeciesId(%)Len(aa)
XP_002720580.1 PREDICTED: fragile X mental retardation 1 O. cuniculus 66.5 176

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: muscle; lymph node; mixed; testis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xq27.3
UniSTS entry: Chr X GDB:187391
UniSTS entry: Chr X GDB:342153
UniSTS entry: Chr X GDB:373842
UniSTS entry: Chr X GDB:596304
UniSTS entry: Chr X GDB:631926
UniSTS entry: GDB:512343
UniSTS entry: GDB:512353
UniSTS entry: Chr X G64325
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

EU048204.1 Homo sapiens antisense fragile X mental retardation protein variant E (ASFMR1) mRNA, complete cds, alternatively spliced PA
EU048203.1 Homo sapiens antisense fragile X mental retardation protein variant A (ASFMR1) mRNA, complete cds, alternatively spliced PA
EU048202.1 Homo sapiens antisense fragile X mental retardation protein variant B (ASFMR1) mRNA, complete cds, alternatively spliced PA
EU048201.1 Homo sapiens antisense fragile X mental retardation protein variant C (ASFMR1) mRNA, complete cds, alternatively spliced PA
EU048200.1 Homo sapiens antisense fragile X mental retardation protein variant D (ASFMR1) mRNA, complete cds, alternatively spliced PA
FJ887036.1 Homo sapiens fragile X mental retardation transcript 4 (FMR4) mRNA, complete sequence
NR_024503.1 Homo sapiens FMR1 antisense RNA 1 (FMR1-AS1), transcript variant 5, non-coding RNA PA
NR_024501.1 Homo sapiens FMR1 antisense RNA 1 (FMR1-AS1), transcript variant 3, non-coding RNA PA
NR_024499.1 Homo sapiens FMR1 antisense RNA 1 (FMR1-AS1), transcript variant 1, non-coding RNA PA
NR_024502.1 Homo sapiens FMR1 antisense RNA 1 (FMR1-AS1), transcript variant 4, non-coding RNA PA
NR_024500.1 Homo sapiens FMR1 antisense RNA 1 (FMR1-AS1), transcript variant 2, non-coding RNA PA

EST sequences (5)

AA909916.1 Clone IMAGE:1505867 mixed 3' read
BX482783.1 Clone DKFZp686M21232 muscle 5' read
AA714549.1 Clone IMAGE:1268810 lymph node 3' read A
BG504253.1 Clone IMAGE:4665455 testis 5' read
AA689465.1 Clone IMAGE:1183933 lymph node 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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