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Proteasome (prosome, macropain) subunit, alpha type, 3 (PSMA3)
Human protein-coding gene PSMA3. Represented by 640 ESTs from 268 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 1840999 - Hs.558799]
SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
| Best Hits and Hits from model organisms | Species | Id(%) | Len(aa) |
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Psma3l gene product |
R. norvegicus |
100.0 |
254 |
|
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PREDICTED: proteasome subunit alpha type-3 isoform 4 |
M. mulatta |
100.0 |
254 |
|
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PREDICTED: proteasome subunit alpha type-3 isoform 1 |
P. anubis |
100.0 |
254 |
|
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PREDICTED: proteasome subunit alpha type-3 isoform 6 |
P. troglodytes |
100.0 |
254 |
|
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PSMA3 gene product |
H. sapiens |
100.0 |
254 |
|
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PREDICTED: proteasome subunit alpha type-3 isoform 1 |
C. lupus familiaris |
100.0 |
254 |
|
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PSMA3 gene product |
B. taurus |
100.0 |
254 |
|
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PREDICTED: proteasome subunit alpha type-3 isoform 1 |
O. aries |
100.0 |
254 |
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PREDICTED: proteasome alpha 3 subunit isoform 1 |
O. cuniculus |
100.0 |
254 |
|
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Psma3 gene product |
M. musculus |
99.6 |
254 |
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PREDICTED: proteasome subunit alpha type-3-like isoform 1 |
E. caballus |
99.6 |
254 |
|
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PREDICTED: proteasome subunit alpha type-3 isoform 1 |
S. scrofa |
99.6 |
254 |
|
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proteasome (prosome, macropain) subunit, alpha type, 3 |
X. laevis |
94.1 |
254 |
|
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psma3 gene product |
D. rerio |
93.3 |
254 |
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proteasome alpha7 subunit |
D. melanogaster |
65.2 |
252 |
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proteasome subunit alpha type-3 |
A. thaliana |
63.9 |
248 |
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20S proteasome alpha subunit G |
C. reinhardtii |
58.6 |
248 |
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proteasome core particle subunit alpha 7 |
S. cerevisiae |
56.1 |
264 |
|
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proteasome component C1 |
N. crassa |
54.5 |
290 |
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Protein PAS-7 |
C. elegans |
50.8 |
249 |
| Other hits (2 of 53) [Show all] | Species | Id(%) | Len(aa) |
|
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PREDICTED: proteasome subunit alpha type-3-like |
M. domestica |
99.2 |
254 |
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PREDICTED: proteasome (prosome, macropain) subunit, alpha type, 3 |
T. guttata |
98.1 |
257 |
GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
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EST Profile: | Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this] |
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GEO Profiles: |
Experimental gene expression data (Gene Expression Omnibus). |
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cDNA Sources: |
mixed; brain; lung; uncharacterized tissue; intestine; esophagus; uterus; pancreas; bladder; stomach; testis; prostate; muscle; lymph node; pharynx; eye; embryonic tissue; adipose tissue; ovary; heart; liver; mouth; skin; bone; pituitary gland; placenta; mammary gland; kidney; blood; connective tissue; vascular; thymus; parathyroid; lymph; trachea; bone marrow; cervix; ear; ascites; thyroid; larynx; salivary gland |
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.
mRNA sequences (11)
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BT006711.1 |
Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 3 mRNA, complete cds |
P |
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NM_002788.3 |
Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 3 (PSMA3), transcript variant 1, mRNA |
PA |
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CR456933.1 |
Homo sapiens full open reading frame cDNA clone RZPDo834D0116D for gene PSMA3, proteasome (prosome, macropain) subunit, alpha type, 3; complete cds, incl. stopcodon |
P |
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BT019715.1 |
Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 3 mRNA, complete cds |
P |
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BC005265.1 |
Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 3, mRNA (cDNA clone MGC:12306 IMAGE:3996256), complete cds |
PA |
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AK315158.1 |
Homo sapiens cDNA, FLJ96131, Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 3(PSMA3), transcript variant 1, mRNA |
P |
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BC029402.1 |
Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 3, mRNA (cDNA clone MGC:32631 IMAGE:4104773), complete cds |
PA |
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NM_152132.2 |
Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 3 (PSMA3), transcript variant 2, mRNA |
PA |
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NR_038123.1 |
Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 3 (PSMA3), transcript variant 3, non-coding RNA |
PA |
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BC038990.1 |
Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 3, mRNA (cDNA clone MGC:47750 IMAGE:6018899), complete cds |
PA |
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D00762.1 |
Homo sapiens mRNA for proteasome subunit C8, complete cds |
P |
EST sequences (10 of 640) [Show all sequences]
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AA973266.1 |
Clone IMAGE:1536912 |
kidney |
3' read |
PA |
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AA977739.1 |
Clone IMAGE:1589624 |
kidney |
3' read |
PA |
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AA987850.1 |
Clone IMAGE:1593956 |
kidney |
3' read |
PA |
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AA993184.1 |
Clone IMAGE:1624316 |
embryonic tissue |
3' read |
PA |
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AI023169.1 |
Clone IMAGE:1651792 |
skin |
3' read |
P |
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AI080686.1 |
Clone IMAGE:1677323 |
mixed |
3' read |
PA |
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AI081758.1 |
Clone IMAGE:1661978 |
mixed |
3' read |
PA |
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AI087889.1 |
Clone IMAGE:1683066 |
parathyroid |
3' read |
PA |
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AI090903.1 |
Clone IMAGE:1689617 |
mixed |
3' read |
PA |
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AI092211.1 |
Clone IMAGE:1691136 |
heart |
3' read |
PA |
Key to Symbols
P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria
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