SPANX family, member C (SPANXC)

NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:1774325 UniGene Hs.558533 Homo sapiens (human) SPANXC

Order cDNA clone, Links

SPANX family, member C (SPANXC)

Human protein-coding gene SPANXC. Represented by 7 ESTs from 4 cDNA libraries. Corresponds to reference sequence NM_022661.2. [UniGene 1774325 - Hs.558533]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_073152.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	SPANXC gene product	H. sapiens	100.0	96
Other hits (		Species	Id(%)	Len(aa)
NP_001009153.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	sperm protein associated with the nucleus, X chromosome, family member A1	P. troglodytes	75.3	96

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	mixed; testis

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	X
	Map position:	Xq27.1

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

BC054023.1	Homo sapiens SPANX family, member C, mRNA (cDNA clone MGC:61861 IMAGE:6648369), complete cds	PA
AJ238277.1	Homo sapiens mRNA for cancer-testis-associated protein (CTp11 gene)	PA
AK225988.1	Homo sapiens mRNA for sperm protein associated with the nucleus, X chromosome, family member A1 variant, clone: FCC111E08	A
NM_022661.2	Homo sapiens SPANX family, member C (SPANXC), mRNA	PA

EST sequences (7)

BX280207.1	Clone IMAGp998I181791_;_IMAGE:730073	testis		PA
EL735846.1		mixed	5' read	P
BU539911.1	Clone IMAGE:6570783	mixed	5' read	P
BU540294.1	Clone IMAGE:6571687	mixed	5' read	P
BU858340.1	Clone IMAGE:6648369	mixed	5' read	PA
AA412270.1	Clone IMAGE:730073	testis	3' read	PA
AA412605.1	Clone IMAGE:730073	testis	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria