> Stearoyl-CoA desaturase (delta-9-desaturase) (SCD)
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UGID:1774194     UniGene Hs.558396     Homo sapiens (human)   SCD Order cDNA clone, Links
Stearoyl-CoA desaturase (delta-9-desaturase) (SCD)

Human protein-coding gene SCD. Represented by 3150 ESTs from 511 cDNA libraries. Corresponds to reference sequence NM_005063.4. [UniGene 1774194 - Hs.558396]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_005054.3 SCD gene product H. sapiens 100.0 358
XP_001168563.1 PREDICTED: acyl-CoA desaturase isoform 2 P. troglodytes 99.7 358
NP_077770.1 stearoyl-coenzyme A desaturase 3 M. musculus 88.9 358
NP_001087809.1 stearoyl-CoA desaturase (delta-9-desaturase) X. laevis 71.9 326
NP_942110.1 scd gene product D. rerio 68.8 320
NP_652731.1 desat1, isoform A D. melanogaster 62.3 361
NP_001255596.1 Protein FAT-6, isoform b C. elegans 61.0 285
Other hits (2 of 42) [Show all]SpeciesId(%)Len(aa)
XP_003904170.1 PREDICTED: acyl-CoA desaturase P. anubis 97.5 358
XP_001107910.2 PREDICTED: acyl-CoA desaturase isoform 2 M. mulatta 97.3 328

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mammary gland; liver; testis; intestine; mixed; prostate; uncharacterized tissue; adipose tissue; embryonic tissue; skin; lung; pancreas; ovary; eye; kidney; muscle; placenta; uterus; lymph; bone; heart; cervix; mouth; blood; stomach; adrenal gland; trachea; bone marrow; thymus; connective tissue; bladder; thyroid; ascites; esophagus; larynx; parathyroid; ear; vascular; spleen; umbilical cord; lymph node; salivary gland; nerve; pharynx; spinal cord; ganglia; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q24.31
UniSTS entry: Chr 10 RH45424 [Map Viewer]
UniSTS entry: Chr 10 RH11186
UniSTS entry: Chr 10 D10S1355E [Map Viewer]
UniSTS entry: Chr 17 RH11040
UniSTS entry: Chr 10 D10S2199 [Map Viewer]
UniSTS entry: Chr 10 RH11163 [Map Viewer]
UniSTS entry: Chr 10 IB293 [Map Viewer]
UniSTS entry: Chr 10 A002P35 [Map Viewer]
UniSTS entry: Chr 17 STS-S70284
UniSTS entry: Chr 20 SHGC-35956
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

NM_005063.4 Homo sapiens stearoyl-CoA desaturase (delta-9-desaturase) (SCD), mRNA P
BC062303.1 Homo sapiens stearoyl-CoA desaturase (delta-9-desaturase), mRNA (cDNA clone MGC:71288 IMAGE:6586153), complete cds PA
AB032261.1 Homo sapiens Scd mRNA for stearoyl-CoA desaturase, complete cds P
AF109362.1 Homo sapiens MSTP008 mRNA, complete cds A
AF097514.1 Homo sapiens stearoyl-CoA desaturase (SCD) mRNA, complete cds PA
AB208982.1 Homo sapiens mRNA for stearoyl-CoA desaturase variant protein P
AK222862.1 Homo sapiens mRNA for stearoyl-CoA desaturase variant, clone: HEP13102 P
BC005807.2 Homo sapiens stearoyl-CoA desaturase (delta-9-desaturase), mRNA (cDNA clone IMAGE:3844850), complete cds PA
AK312312.1 Homo sapiens cDNA, FLJ92619, highly similar to Homo sapiens stearoyl-CoA desaturase (delta-9-desaturase) (SCD), mRNA PA
AF113690.1 Homo sapiens clone FLB4718 A
S70284.1 stearoyl-CoA desaturase [human, adipose tissue, mRNA Partial, 712 nt] P
Y13647.1 Homo sapiens mRNA for stearoyl-CoA desaturase PA

EST sequences (10 of 3150) [Show all sequences]

R14371.1 Clone IMAGE:28903 brain 5' read
AA972173.1 Clone IMAGE:1584022 mixed 3' read P
AA985118.1 Clone IMAGE:1616241 brain 3' read
AA985543.1 Clone IMAGE:1601182 lung 3' read A
AA985545.1 Clone IMAGE:1601163 lung 3' read A
AA922923.1 Clone IMAGE:1457405 intestine 3' read A
AI018246.1 Clone IMAGE:1626761 mixed 3' read P
AI023556.1 Clone IMAGE:1642750 testis 3' read A
AI022120.1 Clone IMAGE:1650882 parathyroid 3' read A
R19391.1 Clone IMAGE:129981 mixed 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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