> Nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:1634355     UniGene Hs.557550     Homo sapiens (human)   NPM1 Order cDNA clone, Links
Nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1)

Human protein-coding gene NPM1. Represented by 4853 ESTs from 596 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 1634355 - Hs.557550]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003900562.1 PREDICTED: nucleophosmin isoform 1 P. anubis 100.0 293
NP_001238905.1 nucleophosmin P. troglodytes 100.0 293
NP_002511.1 NPM1 gene product H. sapiens 100.0 293
XP_003134105.1 PREDICTED: nucleophosmin-like isoform 1 S. scrofa 100.0 293
NP_001239100.1 nucleophosmin C. lupus familiaris 99.7 293
XP_001503151.1 PREDICTED: nucleophosmin-like isoform 1 E. caballus 99.7 293
NP_032748.1 Npm1 gene product M. musculus 99.3 291
NP_001079507.1 nucleophosmin X. laevis 73.7 299
NP_955460.1 npm1a gene product D. rerio 54.3 281
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
XP_002804677.1 PREDICTED: nucleophosmin-like isoform 2 M. mulatta 99.3 302
NP_037124.1 Npm1 gene product R. norvegicus 99.3 291

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; bone marrow; brain; skin; testis; lung; prostate; uncharacterized tissue; bladder; uterus; mixed; kidney; eye; intestine; liver; pancreas; placenta; mammary gland; stomach; salivary gland; blood; bone; pharynx; muscle; ovary; lymph; thyroid; cervix; connective tissue; vascular; lymph node; ascites; heart; thymus; umbilical cord; ear; pituitary gland; adrenal gland; tonsil; spleen; parathyroid; mouth; larynx; adipose tissue; trachea; nerve; esophagus; epididymis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5q35.1
UniSTS entry: Chr 5 RH80894
UniSTS entry: Chr 5 REN60444
UniSTS entry: Chr 15 G42957
UniSTS entry: Chr 6 REN60441
UniSTS entry: Chr 12 GDB:314027
UniSTS entry: Chr 1 D10S2448
UniSTS entry: Chr 3 G42925
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (40)

M23613.1 Human nucleophosmin mRNA, complete cds P
M26697.1 Human nucleolar protein (B23) mRNA, complete cds P
J02590.1 Human nucleolar phosphoprotein B23 mRNA, clone hpB1 P
M31004.1 Human nuclear phosphoprotein B23 mRNA, clone hpB2 P
BT007011.1 Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin) mRNA, complete cds P
BC050628.1 Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin), mRNA (cDNA clone MGC:60104 IMAGE:5575414), complete cds PA
AY347529.1 Homo sapiens nucleophosmin mRNA, complete cds PA
NM_199185.3 Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1), transcript variant 2, mRNA P
AK000472.1 Homo sapiens cDNA FLJ20465 fis, clone KAT06236 PA
AY740640.1 Homo sapiens nucleophosmin (NPM1) mRNA, complete cds P
AY740639.1 Homo sapiens nucleophosmin (NPM1) mRNA, complete cds P
AY740638.1 Homo sapiens nucleophosmin (NPM1) mRNA, complete cds P
AY740637.1 Homo sapiens nucleophosmin (NPM1) mRNA, complete cds P
AY740636.1 Homo sapiens nucleophosmin (NPM1) mRNA, complete cds P
AY740635.1 Homo sapiens nucleophosmin (NPM1) mRNA, complete cds P
AY740634.1 Homo sapiens nucleophosmin (NPM1) mRNA, NPM1-A allele, complete cds P
M28699.1 Homo sapiens nucleolar phosphoprotein B23 (NPM1) mRNA, complete cds P
X16934.1 Human hB23 gene for B23 nucleophosmin P
BC107754.1 Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin), mRNA (cDNA clone MGC:104254 IMAGE:6736004), complete cds PA
NM_001037738.2 Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1), transcript variant 3, mRNA PA
DQ303464.1 Homo sapiens mutant nucleolar phosphoprotein B23 (NPM1) mRNA, complete cds PA
NM_002520.6 Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1), transcript variant 1, mRNA P
BC002398.2 Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin), mRNA (cDNA clone MGC:8463 IMAGE:2821577), complete cds PA
BC003670.1 Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin), mRNA (cDNA clone IMAGE:3932340), partial cds PA
AB042278.1 Homo sapiens mRNA for nucleophosmin/B23.2, complete cds P
BC008495.1 Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin), mRNA (cDNA clone MGC:14826 IMAGE:4276604), complete cds PA
BC012566.1 Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin), mRNA (cDNA clone MGC:13433 IMAGE:4097025), complete cds PA
EF429251.1 Homo sapiens truncated nucleolar phosphoprotein B23 (NPM1) mRNA, complete cds P
BC014349.1 Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin), mRNA (cDNA clone MGC:24185 IMAGE:3511037), complete cds PA
BC016824.1 Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin), mRNA (cDNA clone MGC:24544 IMAGE:4106286), complete cds PA
BC016768.1 Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin), mRNA (cDNA clone MGC:22724 IMAGE:4081364), complete cds PA
BC016716.1 Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin), mRNA (cDNA clone MGC:24404 IMAGE:4068167), complete cds PA
BC009623.2 Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin), mRNA (cDNA clone MGC:17308 IMAGE:3877633), complete cds PA
BC021983.1 Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin), mRNA (cDNA clone MGC:22736 IMAGE:4106023), complete cds PA
BC021668.1 Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin), mRNA (cDNA clone MGC:22695 IMAGE:3930893), complete cds PA
AK290652.1 Homo sapiens cDNA FLJ76122 complete cds, highly similar to Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1), transcript variant 1, mRNA P
AB451361.1 Homo sapiens NPM1 mRNA for nucleophosmin 1 isoform 1, partial cds, clone: FLJ08034AAAF P
AB451236.1 Homo sapiens NPM1 mRNA for nucleophosmin 1 isoform 1, complete cds, clone: FLJ08034AAAN P
BC020467.1 Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin), mRNA (cDNA clone IMAGE:3872185) PA
D28343.1 Homo sapiens mRNA for nucleolar phosphoprotein B23, 5'UTR region

EST sequences (10 of 4853) [Show all sequences]

AA863017.1 Clone IMAGE:1456441 kidney 3' read
AA864250.1 Clone IMAGE:1460206 kidney 3' read
AA864577.1 Clone IMAGE:1459393 kidney 3' read A
AA968900.1 Clone IMAGE:1574604 kidney 3' read
AA973533.1 Clone IMAGE:1569230 lung 3' read
AA975638.1 Clone IMAGE:1591018 kidney 3' read
AA983352.1 Clone IMAGE:1590969 kidney 3' read
AA989188.1 Clone IMAGE:1594090 kidney 3' read
AA989199.1 Clone IMAGE:1594091 kidney 3' read A
AI016487.1 Clone IMAGE:1623697 embryonic tissue 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help