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UGID:1629969     UniGene Hs.554831     Homo sapiens (human)   WDR33
WD repeat domain 33 (WDR33)

Human protein-coding gene WDR33. Represented by 445 ESTs from 231 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 1629969 - Hs.554831]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001139756.1 PREDICTED: pre-mRNA 3' end processing protein WDR33 isoform 3 P. troglodytes 100.0 1335
NP_060853.3 WDR33 gene product H. sapiens 100.0 1335
XP_003909318.1 PREDICTED: pre-mRNA 3' end processing protein WDR33 P. anubis 99.9 1335
XP_001089955.2 PREDICTED: WD repeat-containing protein 33 M. mulatta 99.7 1367
NP_083142.2 Wdr33 gene product M. musculus 97.7 1329
NP_001181857.1 WD repeat-containing protein 33 isoform 1 D. rerio 78.0 1100
NP_730982.1 CG1109, isoform A D. melanogaster 74.7 462
NP_496985.1 Protein PFS-2 C. elegans 57.8 434
NP_001190302.1 Flowering time control protein FY A. thaliana 54.8 427
XP_957024.2 protein PFS2 N. crassa 52.3 239
Other hits (2 of 53) [Show all]SpeciesId(%)Len(aa)
XP_001504985.1 PREDICTED: WD repeat-containing protein 33 E. caballus 99.2 1329
XP_003639747.1 PREDICTED: WD repeat-containing protein 33-like C. lupus familiaris 99.2 1335

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; lung; placenta; uterus; intestine; heart; eye; mixed; embryonic tissue; testis; bone; kidney; thymus; mammary gland; blood; stomach; liver; prostate; lymph node; ovary; pancreas; adipose tissue; muscle; skin; pharynx; bone marrow; connective tissue; spleen; adrenal gland; trachea; cervix; esophagus; ear; thyroid; ascites; vascular; lymph; bladder
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q14.3
UniSTS entry: Chr 2 G20687
UniSTS entry: Chr 2 A006B44 [Map Viewer]
UniSTS entry: Chr 2 RH68215
UniSTS entry: Chr 2 SHGC-17215 [Map Viewer]
UniSTS entry: Chr 2 SHGC-30980 [Map Viewer]
UniSTS entry: Chr 2 RH15869 [Map Viewer]
UniSTS entry: Chr 2 SGC31777 [Map Viewer]
UniSTS entry: Chr 2 RH104385
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

AK123510.1 Homo sapiens cDNA FLJ41516 fis, clone BRTHA2011691
BC068484.1 Homo sapiens WD repeat domain 33, mRNA (cDNA clone IMAGE:30345533), complete cds PA
AK002156.1 Homo sapiens cDNA FLJ11294 fis, clone PLACE1009708 P
NM_001006623.2 Homo sapiens WD repeat domain 33 (WDR33), transcript variant 3, mRNA P
NM_001006622.2 Homo sapiens WD repeat domain 33 (WDR33), transcript variant 2, mRNA P
NM_018383.4 Homo sapiens WD repeat domain 33 (WDR33), transcript variant 1, mRNA PA
AK223319.1 Homo sapiens mRNA for WD repeat domain 33 isoform 2 variant, clone: TMS08632 PA
BC108671.1 Homo sapiens cDNA clone IMAGE:6151131, containing frame-shift errors PA
AB044749.1 Homo sapiens mRNA for WDC146, complete cds PA
BC013990.2 Homo sapiens WD repeat domain 33, mRNA (cDNA clone IMAGE:3640219), complete cds PA
BC010283.1 Homo sapiens WD repeat domain 33, mRNA (cDNA clone IMAGE:3048789) PA
AK098003.1 Homo sapiens cDNA FLJ40684 fis, clone THYMU2023900, weakly similar to Collagen alpha 1(XI) chain P
AL834365.1 Homo sapiens mRNA; cDNA DKFZp762F0712 (from clone DKFZp762F0712) PA
BC005401.1 Homo sapiens WD repeat domain 33, mRNA (cDNA clone IMAGE:3839672), partial cds PA

EST sequences (10 of 445) [Show all sequences]

AA908953.1 Clone IMAGE:1523092 mixed 3' read
AA927896.1 Clone IMAGE:1541391 mixed 3' read A
AI038864.1 Clone IMAGE:1659617 embryonic tissue 3' read
AI039494.1 Clone IMAGE:1658914 embryonic tissue 3' read
AI075387.1 Clone IMAGE:1682182 skin 3' read PA
CB068697.1 Clone IMAGE:6554085 pancreas 3' read
CB069962.1 Clone IMAGE:6554085 pancreas 5' read
AI150922.1 Clone IMAGE:1703787 brain 3' read PA
BX115033.1 Clone IMAGp998N161775_;_IMAGE:724047 ovary A
BX103711.1 Clone IMAGp998E141794_;_IMAGE:731125 testis A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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