> Ring finger protein 123 (RNF123)
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UGID:1548633     UniGene Hs.553723     Homo sapiens (human)   RNF123 Order cDNA clone, Links
Ring finger protein 123 (RNF123)

Human protein-coding gene RNF123. Represented by 394 ESTs from 160 cDNA libraries. Corresponds to reference sequence NM_022064.3. [UniGene 1548633 - Hs.553723]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_071347.2 RNF123 gene product H. sapiens 100.0 1313
NP_115932.1 Rnf123 gene product M. musculus 97.0 1313
XP_001696944.1 hypothetical protein CHLREDRAFT_176296 C. reinhardtii 52.8 161
NP_850020.1 ubiquitination-promoting complex protein 1 A. thaliana 47.8 138
Other hits (2 of 33) [Show all]SpeciesId(%)Len(aa)
XP_003894461.1 PREDICTED: E3 ubiquitin-protein ligase RNF123 P. anubis 99.5 1313
XP_001164974.3 PREDICTED: E3 ubiquitin-protein ligase RNF123 P. troglodytes 99.4 1316

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; mixed; uncharacterized tissue; embryonic tissue; pituitary gland; uterus; liver; ovary; connective tissue; placenta; pancreas; adrenal gland; mouth; vascular; thymus; bone marrow; mammary gland; blood; umbilical cord; skin; intestine; eye; lung; prostate; lymph; muscle; trachea; lymph node; kidney; stomach; bladder; larynx; spleen; heart; ascites
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3p24.3
UniSTS entry: Chr 3 A005X28 [Map Viewer]
UniSTS entry: Chr 3 G54105
UniSTS entry: Chr 3 RH91732
UniSTS entry: Chr 3 RH15941
UniSTS entry: Chr 3 RH78233 [Map Viewer]
UniSTS entry: Chr 3 A007E08
UniSTS entry: Chr 3 MARC_17265-17266:1024683815:1
UniSTS entry: Chr 3 A004P45
UniSTS entry: Chr 3 RH78461 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

AK126883.1 Homo sapiens cDNA FLJ44935 fis, clone BRAMY3017965 P
BC057392.1 Homo sapiens ring finger protein 123, mRNA (cDNA clone IMAGE:6174547), partial cds PA
AF370367.1 Homo sapiens FP1477 mRNA, complete cds PA
CR627051.1 Homo sapiens mRNA; cDNA DKFZp686C2222 (from clone DKFZp686C2222) PA
AY744152.1 Homo sapiens ubiquitin ligase (KPC1) mRNA, complete cds P
BC088801.1 Homo sapiens ring finger protein 123, mRNA (cDNA clone IMAGE:6376662), partial cds PA
AK022627.1 Homo sapiens cDNA FLJ12565 fis, clone NT2RM4000848 P
AK026968.1 Homo sapiens cDNA: FLJ23315 fis, clone HEP12021 PA
BC112900.1 Homo sapiens cDNA clone IMAGE:3909203, containing frame-shift errors PA
NM_022064.3 Homo sapiens ring finger protein 123 (RNF123), mRNA PA
AL136729.1 Homo sapiens mRNA; cDNA DKFZp434A0610 (from clone DKFZp434A0610) PA
BC130632.1 Homo sapiens ring finger protein 123, mRNA (cDNA clone MGC:163504 IMAGE:40146663), complete cds P
AK308607.1 Homo sapiens cDNA, FLJ98648 P
AK308130.1 Homo sapiens cDNA, FLJ98078 P
AK096353.1 Homo sapiens cDNA FLJ39034 fis, clone NT2RP7008085, highly similar to Homo sapiens ring finger protein 123 (RNF123), mRNA P
AK090632.1 Homo sapiens cDNA FLJ33313 fis, clone BNGH42006135 P
AL832344.1 Homo sapiens mRNA; cDNA DKFZp451N085 (from clone DKFZp451N085) PA
AL832138.1 Homo sapiens mRNA; cDNA DKFZp686M2210 (from clone DKFZp686M2210) PA
AL832034.1 Homo sapiens mRNA; cDNA DKFZp451P244 (from clone DKFZp451P244) PA
BC041145.1 Homo sapiens ring finger protein 123, mRNA (cDNA clone IMAGE:6070768), partial cds PA

EST sequences (10 of 394) [Show all sequences]

BX103046.1 Clone IMAGp998L13653_;_IMAGE:293148 mixed P
AI252637.1 Clone IMAGE:1977084 brain 3' read A
R28342.1 Clone IMAGE:134758 placenta 5' read
R28343.1 Clone IMAGE:134758 placenta 3' read
R28389.1 Clone IMAGE:133792 placenta 3' read A
AI261466.1 Clone IMAGE:1871168 intestine 3' read A
CB156197.1 Clone L18POOL1n1-2-G03 liver 5' read P
CB148222.1 Clone B1T694954-14-H08 brain 5' read P
CB152651.1 Clone B1T694954-19-A02 brain 5' read P
CB130770.1 Clone L13SNU387-12-B12 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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