> Myopalladin (MYPN)
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UGID:138224     UniGene Hs.55205     Homo sapiens (human)   MYPN Links
Myopalladin (MYPN)

Human protein-coding gene MYPN. Represented by 80 ESTs from 26 cDNA libraries. EST representation biased toward larynx. Corresponds to 5 reference sequences (different isoforms). [UniGene 138224 - Hs.55205]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_115967.2 MYPN gene product H. sapiens 100.0 1319
XP_003312631.1 PREDICTED: LOW QUALITY PROTEIN: myopalladin P. troglodytes 99.6 1319
NP_892037.2 Mypn gene product M. musculus 89.2 1314
XP_003200749.1 PREDICTED: palladin D. rerio 53.2 1120
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_003903919.1 PREDICTED: myopalladin isoform 1 P. anubis 98.5 1319
XP_002808546.1 PREDICTED: LOW QUALITY PROTEIN: myopalladin-like M. mulatta 98.0 1318

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: larynx [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: larynx; uncharacterized tissue; liver; muscle; mixed; skin; eye; connective tissue; pancreas; cervix; testis; heart; vascular; bone marrow
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q21.3
UniSTS entry: Chr 10 RH48646 [Map Viewer]
UniSTS entry: Chr 10 G59578
UniSTS entry: Chr 10 RH104074
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

BX648564.1 Homo sapiens mRNA; cDNA DKFZp779E1654 (from clone DKFZp779E1654) PA
BX647640.1 Homo sapiens mRNA; cDNA DKFZp451L196 (from clone DKFZp451L196) PA
BX647637.1 Homo sapiens mRNA; cDNA DKFZp451G086 (from clone DKFZp451G086) PA
AF328296.1 Homo sapiens myopalladin mRNA, complete cds PA
NM_032578.3 Homo sapiens myopalladin (MYPN), transcript variant 1, mRNA PA
BC142609.1 Homo sapiens myopalladin, mRNA (cDNA clone IMAGE:40147205), complete cds PA
AL834247.2 Homo sapiens mRNA; cDNA DKFZp451E012 (from clone DKFZp451E012); complete cds PA
AL832379.1 Homo sapiens mRNA; cDNA DKFZp451K027 (from clone DKFZp451K027); complete cds PA
AL832002.2 Homo sapiens mRNA; cDNA DKFZp451M023 (from clone DKFZp451M023); complete cds PA
BC144333.1 Homo sapiens cDNA clone IMAGE:9052853, with apparent retained intron P
BC144334.1 Homo sapiens cDNA clone IMAGE:9052854 P
NM_001256268.1 Homo sapiens myopalladin (MYPN), transcript variant 5, mRNA PA
NM_001256267.1 Homo sapiens myopalladin (MYPN), transcript variant 4, mRNA PA
NR_045662.3 Homo sapiens myopalladin (MYPN), transcript variant 2, non-coding RNA PA
NR_045663.3 Homo sapiens myopalladin (MYPN), transcript variant 3, non-coding RNA PA

EST sequences (10 of 80) [Show all sequences]

BX109508.1 Clone IMAGp998D18738_;_IMAGE:325601 skin
CB136621.1 Clone L5HLK1-41-B08 liver 5' read
CB126647.1 Clone L5HLK1s1-22-B12 liver 5' read P
CB126945.1 Clone L5HLK1s1-23-F10 liver 5' read P
AI400346.1 Clone IMAGE:2115959 mixed 3' read A
F24218.1 Clone s4000005B03 muscle A
F32501.1 Clone s3000045H04 muscle
F34748.1 Clone sH3-000002-4/F11 muscle
BX496404.1 Clone DKFZp779H2327 liver 5' read P
BX500271.1 Clone DKFZp779L0254 liver 5' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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