> Family with sequence similarity 180, member A (FAM180A)
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UGID:138223     UniGene Hs.55200     Homo sapiens (human)   FAM180A Order cDNA clone, Links
Family with sequence similarity 180, member A (FAM180A)

Human protein-coding gene FAM180A. Represented by 26 ESTs from 21 cDNA libraries. EST representation biased toward chondrosarcoma; adult. Corresponds to reference sequence NM_205855.3. [UniGene 138223 - Hs.55200]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_995327.1 FAM180A gene product H. sapiens 100.0 172
NP_775551.1 Fam180a gene product M. musculus 79.5 171
Other hits (2 of 15) [Show all]SpeciesId(%)Len(aa)
XP_001146814.1 PREDICTED: protein FAM180A isoform 1 P. troglodytes 99.4 172
XP_001103728.1 PREDICTED: protein FAM180A-like M. mulatta 98.1 154

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: chondrosarcoma [show more like this]
adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: connective tissue; embryonic tissue; uncharacterized tissue; mixed; vascular; liver; brain; trachea; uterus; bone; lung; skin
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7q33
UniSTS entry: Chr 7 RH46984
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AY358803.1 Homo sapiens clone DNA96893 HWKM1940 (UNQ1940) mRNA, complete cds PA
NM_205855.3 Homo sapiens family with sequence similarity 180, member A (FAM180A), mRNA PA
AK290250.1 Homo sapiens cDNA FLJ78102 complete cds, highly similar to Homo sapiens HWKM1940 (UNQ1940), mRNA P
AK310180.1 Homo sapiens cDNA, FLJ17222
BC137312.1 Homo sapiens family with sequence similarity 180, member A, mRNA (cDNA clone MGC:168932 IMAGE:9021309), complete cds P
BC137311.1 Homo sapiens family with sequence similarity 180, member A, mRNA (cDNA clone MGC:168931 IMAGE:9021308), complete cds P
AK297754.1 Homo sapiens cDNA FLJ50073 complete cds P

EST sequences (10 of 26) [Show all sequences]

CB052873.1 Clone IMAGE:3290633 uncharacterized tissue 5' read
BX103558.1 Clone IMAGp998O14698_;_IMAGE:310501 skin
CD357161.1 Clone IMAGE:30404700 vascular 5' read
AW135644.1 Clone IMAGE:2713888 mixed 3' read
AW449822.1 Clone IMAGE:2734830 uncharacterized tissue 3' read A
BE670070.1 Clone IMAGE:3283927 lung 3' read
DB355513.1 Clone HEMBA1001844 embryonic tissue 3' read A
DB319938.1 Clone HSYRA2004475 connective tissue 3' read A
BG569393.1 Clone IMAGE:4722751 liver 5' read
BI040280.1 brain


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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