> T cell receptor alpha variable 12-2 (TRAV12-2)
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UGID:1414667     UniGene Hs.546374     Homo sapiens (human)   TRAV12-2
T cell receptor alpha variable 12-2 (TRAV12-2)

Human protein-coding gene TRAV12-2. Represented by 3 ESTs from 3 cDNA libraries. [UniGene 1414667 - Hs.546374]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003356764.1 PREDICTED: hypothetical protein LOC100626987 S. scrofa 68.3 142

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: pharynx; stomach; uncharacterized tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 14
Map position: 14q11
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (75)

AY247836.1 Homo sapiens T cell receptor alpha chain (TCRA) mRNA, TCRA-AV12S2 J43 AC allele, partial cds
AB360829.1 Homo sapiens mRNA for T cell receptor alpha variable 12, partial cds, clone: non 315 P
AB305742.1 Homo sapiens mRNA for T cell receptor alpha variable 12, partial cds, clone: SEB 308
AB305739.1 Homo sapiens mRNA for T cell receptor alpha variable 12, partial cds, clone: SEB 305 P
AB305730.1 Homo sapiens mRNA for T cell receptor alpha variable 12, partial cds, clone: SEB 286 P
AB305705.1 Homo sapiens mRNA for T cell receptor alpha variable 12, partial cds, clone: SEB 198 P
AB305703.1 Homo sapiens mRNA for T cell receptor alpha variable 12, partial cds, clone: SEB 193 P
AB305679.1 Homo sapiens mRNA for T cell receptor alpha variable 12, partial cds, clone: SEB 117-2 P
AB306116.1 Homo sapiens mRNA for T cell receptor alpha variable 12, partial cds, clone: un 266 P
AB306105.1 Homo sapiens mRNA for T cell receptor alpha variable 12, partial cds, clone: un 250 P
AB306068.1 Homo sapiens mRNA for T cell receptor alpha variable 12, partial cds, clone: un 163 P
AB306021.1 Homo sapiens mRNA for T cell receptor alpha variable 12, partial cds, clone: un 63
L34698.1 Homo sapiens T-cell receptor alpha (TCRA) mRNA (HLA-A3, 29; B7, 44; DR 2, 7), complete cds
AF327017.1 Homo sapiens clone 359.11 T cell receptor alpha chain mRNA, partial cds
M27369.1 Homo sapiens (clone HAVT06) unproductively rearranged T cell receptor (TCRA) mRNA, VDJC region, 5'end
S60781.1 Homo sapiens T-cell receptor alpha chain variable region (TCR V 2.1) mRNA, partial cds
M81774.1 Homo sapiens T-cell receptor alpha (TCRB) mRNA, partial cds P
AF020651.1 Homo sapiens T cell receptor alpha chain variable region (AV2S1A1) mRNA, partial cds P
AF020639.1 Homo sapiens T cell receptor alpha chain variable region (AV2S1A1) mRNA, partial cds
X92783.1 H.sapiens mRNA for T cell receptor alpha (clone XPMS2I)
X92766.1 H.sapiens mRNA for T cell receptor alpha (clone XPBP173I)
X92883.1 H.sapiens mRNA for T cell receptor alpha (clone XPHC46IV)
U39107.1 Homo sapiens T cell receptor alpha chain mRNA, partial cds
S82066.1 V alpha 2.1-J alpha 9.7=T-cell receptor alpha chain variable region {C alpha region} [human, melanoma-specific cytotoxic T-cell clone DT252 12-6C7, melanoma patient 252, mRNA Partial, 255 nt]
S82064.1 V alpha 2.1-J alpha 6.1=T-cell receptor alpha chain variable region {C alpha region} [human, melanoma-specific cytotoxic T-cell clone DT252 12-1H10, melanoma patient 252, mRNA Partial, 285 nt]
X04946.1 Human mRNA for T-cell receptor alpha-chain HAP71 V(a)2.1/J(a)Q
X04940.1 Human mRNA for T-cell receptor alpha-chain HAP26 V(a)2.1-J(a)L
X58746.1 Human mRNA for T cell receptor V alpha gene segment V-alpha-2, clone IGRa09
U40463.1 Human T cell receptor alpha chain (TCRAV2S1-N-J35-C) mRNA, melanoma-infiltrating T lymphocyte clone MU-9, -115, partial cds
U40776.1 Human T-cell receptor alpha chain (TCRAV2S1J22) mRNA, partial cds
M17653.1 Human T-cell receptor active alpha-chain V-region (V-J-C) mRNA, partial cds, clone AC112
M17652.1 Human T-cell receptor active alpha-chain V-region (V-J-C) mRNA, partial cds, clone AF110
AF532856.1 Homo sapiens clone SCO23 T-cell receptor alpha mRNA, partial cds
AF532855.1 Homo sapiens clone SCO38 T-cell receptor alpha mRNA, partial cds
AF532854.1 Homo sapiens clone SCO31 T-cell receptor alpha mRNA, partial cds
AF532853.1 Homo sapiens clone SCO26 T-cell receptor alpha mRNA, partial cds
AF532852.1 Homo sapiens clone SCO95 T-cell receptor alpha mRNA, partial cds
AF532851.1 Homo sapiens clone SCO46 T-cell receptor alpha mRNA, partial cds
AF532850.1 Homo sapiens clone SCO18 T-cell receptor alpha mRNA, partial cds
AF532849.1 Homo sapiens clone SCO81 T-cell receptor alpha mRNA, partial cds
AF532848.1 Homo sapiens clone SCO25 T-cell receptor alpha mRNA, partial cds
AF532847.1 Homo sapiens clone SCO57 T-cell receptor alpha mRNA, partial cds
AF532846.1 Homo sapiens clone SCO3 T-cell receptor alpha mRNA, partial cds
AF532845.1 Homo sapiens clone SCO74 T-cell receptor alpha mRNA, partial cds
AF532844.1 Homo sapiens clone SCO41 T-cell receptor alpha mRNA, partial cds
AF532843.1 Homo sapiens clone SCO43 T-cell receptor alpha mRNA, partial cds
AF532842.1 Homo sapiens clone SCO73 T-cell receptor alpha mRNA, partial cds
AF532841.1 Homo sapiens clone SCO5 T-cell receptor alpha mRNA, partial cds
AF532840.1 Homo sapiens clone SCO1 T-cell receptor alpha mRNA, partial cds
AF532839.1 Homo sapiens clone SCO80 T-cell receptor alpha mRNA, partial cds
AF532838.1 Homo sapiens clone SCO64 T-cell receptor alpha mRNA, partial cds
AF532837.1 Homo sapiens clone SCO106 T-cell receptor alpha mRNA, partial cds
AY135853.1 Homo sapiens clone PSA.S.8 T-cell receptor alpha chain mRNA, partial cds
AY135852.1 Homo sapiens clone PSA.S.36 T-cell receptor alpha chain mRNA, partial cds
AY135851.1 Homo sapiens clone PSA.S.2 T-cell receptor alpha chain mRNA, partial cds
AY135850.1 Homo sapiens clone PSA.S.20 T-cell receptor alpha chain mRNA, partial cds
AY135849.1 Homo sapiens clone PSA.S.56 T-cell receptor alpha chain mRNA, partial cds
AY135846.1 Homo sapiens clone PSA.S.28 T-cell receptor alpha chain mRNA, partial cds
AY135848.1 Homo sapiens clone PSA.S.45 T-cell receptor alpha chain mRNA, partial cds
AY135847.1 Homo sapiens clone PSA.S.43 T-cell receptor alpha chain mRNA, partial cds
AY135845.1 Homo sapiens clone PSA.S.41 T-cell receptor alpha chain mRNA, partial cds
AY135844.1 Homo sapiens clone PSA.S.38 T-cell receptor alpha chain mRNA, partial cds
AY135843.1 Homo sapiens clone PSA.S.55 T-cell receptor alpha chain mRNA, partial cds
AY135842.1 Homo sapiens clone PSA.S.59 T-cell receptor alpha chain mRNA, partial cds
AY135841.1 Homo sapiens clone PSA.S.21 T-cell receptor alpha chain mRNA, partial cds
AY135840.1 Homo sapiens clone PSA.S.54 T-cell receptor alpha chain mRNA, partial cds
AY135839.1 Homo sapiens clone PSA.S.27 T-cell receptor alpha chain mRNA, partial cds
AY135838.1 Homo sapiens clone PSA.S.53 T-cell receptor alpha chain mRNA, partial cds
AY135837.1 Homo sapiens clone PSA.S.29 T-cell receptor alpha chain mRNA, partial cds
AY135836.1 Homo sapiens clone PSA.S.14 T-cell receptor alpha chain mRNA, partial cds
AY135835.1 Homo sapiens clone PSA.S.13 T-cell receptor alpha chain mRNA, partial cds
AY135834.1 Homo sapiens clone PSA.S.33 T-cell receptor alpha chain mRNA, partial cds
AY135833.1 Homo sapiens clone PSA.S.60 T-cell receptor alpha chain mRNA, partial cds
AY135832.1 Homo sapiens clone PSA.S.34 T-cell receptor alpha chain mRNA, partial cds
U40464.1 Human T cell receptor alpha chain (TRCAV2S1-N-AJ41-C) mRNA, anti-melanoma cytotoxic T lymphocyte clone MU-45, -63, -79, partial cds

EST sequences (3)

CD693824.1 pharynx
DA963081.1 Clone STOMA2000869 stomach 5' read
AU099405.1 Clone HSI01702 uncharacterized tissue 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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