> Histone cluster 1, H3a (HIST1H3A)
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UGID:1414608     UniGene Hs.546315     Homo sapiens (human)   HIST1H3A Order cDNA clone, Links
Histone cluster 1, H3a (HIST1H3A)

Human protein-coding gene HIST1H3A. Represented by 23 ESTs from 7 cDNA libraries. Corresponds to reference sequence NM_003529.2. [UniGene 1414608 - Hs.546315]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_527253.2 PREDICTED: histone H3.1-like P. troglodytes 100.0 152
NP_659539.1 Hist1h3g gene product M. musculus 100.0 135
XP_001055231.1 PREDICTED: histone cluster 1, H3f-like R. norvegicus 100.0 135
XP_001083629.1 PREDICTED: histone H3.2-like isoform 1 M. mulatta 100.0 135
XP_003897202.1 PREDICTED: histone H3.1-like P. anubis 100.0 135
NP_066298.1 HIST1H3F gene product H. sapiens 100.0 135
XP_003434243.1 PREDICTED: histone H3.1-like C. lupus familiaris 100.0 135
XP_001496812.1 PREDICTED: histone H3.1-like E. caballus 100.0 135
XP_001927801.1 PREDICTED: histone H3.1-like S. scrofa 100.0 135
XP_002697506.1 PREDICTED: histone H3.1 B. taurus 100.0 135
XP_004019075.1 PREDICTED: histone H3.1-like O. aries 100.0 135
XP_002714239.1 PREDICTED: histone cluster 1, H3f-like O. cuniculus 100.0 135
NP_724345.1 histone H3 D. melanogaster 99.3 135
XP_001337584.1 PREDICTED: histone H3.2-like D. rerio 99.3 135
NP_001091428.1 histone H3.2 X. laevis 99.3 135
NP_189372.1 histone H3 A. thaliana 97.1 135
NP_496899.1 Protein HIS-42 C. elegans 97.1 135
XP_001690671.1 histone H3 C. reinhardtii 95.6 134
XP_956003.1 histone H3 N. crassa 90.4 135
NP_009564.1 Hht1p S. cerevisiae 89.0 135
Other hits (2 of 56) [Show all]SpeciesId(%)Len(aa)
XP_001620157.1 hypothetical protein NEMVEDRAFT_v1g148952 N. vectensis 99.3 139
XP_002731238.1 PREDICTED: histone cluster 2, H3c2-like S. kowalevskii 99.3 135

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; eye; uterus; liver; brain
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6p22.1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

NM_003529.2 Homo sapiens histone cluster 1, H3a (HIST1H3A), mRNA P
BC066246.1 Homo sapiens histone cluster 1, H3a, mRNA (cDNA clone MGC:79341 IMAGE:7002069), complete cds P
BC066245.1 Homo sapiens histone cluster 1, H3a, mRNA (cDNA clone MGC:79340 IMAGE:7002068), complete cds P
BC066247.1 Homo sapiens histone cluster 1, H3a, mRNA (cDNA clone MGC:79342 IMAGE:7002070), complete cds P
BC067490.1 Homo sapiens histone cluster 1, H3a, mRNA (cDNA clone MGC:79343 IMAGE:7002071), complete cds P
BC067491.1 Homo sapiens histone cluster 1, H3a, mRNA (cDNA clone MGC:79344 IMAGE:7002072), complete cds P
BC069303.1 Homo sapiens histone cluster 1, H3a, mRNA (cDNA clone MGC:97421 IMAGE:7262697), complete cds P
CR541858.1 Homo sapiens full open reading frame cDNA clone RZPDo834H0632D for gene HIST1H3A, histone 1, H3a; complete cds, incl. stopcodon P

EST sequences (10 of 23) [Show all sequences]

CD671279.1 Clone fg02g08 eye 5' read P
CF272042.2 Clone IMAGE:7002072 mixed 5' read P
CF272043.2 Clone IMAGE:7002072 mixed 5' read P
CF272044.2 Clone IMAGE:7002071 mixed 5' read P
CF272045.2 Clone IMAGE:7002071 mixed 5' read P
CF272053.2 Clone IMAGE:7002067 mixed 5' read P
CF272025.1 Clone IMAGE:7002086 mixed 5' read P
CF272038.2 Clone IMAGE:7002075 mixed 5' read P
CF272036.2 Clone IMAGE:7002076 mixed 5' read P
CF272037.2 Clone IMAGE:7002076 mixed 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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