> Ribosomal protein S3 (RPS3)
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UGID:1382600     UniGene Hs.546286     Homo sapiens (human)   RPS3 Order cDNA clone, Links
Ribosomal protein S3 (RPS3)

Human protein-coding gene RPS3. Represented by 6443 ESTs from 678 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 1382600 - Hs.546286]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001247435.1 RPS3 gene product H. sapiens 100.0 258
XP_003968267.1 PREDICTED: 40S ribosomal protein S3-like T. rubripes 100.0 244
NP_036182.1 Rps3 gene product M. musculus 100.0 242
NP_001009239.1 Rps3 gene product R. norvegicus 100.0 242
XP_001362617.1 PREDICTED: 40S ribosomal protein S3-like M. domestica 100.0 242
XP_003225465.1 PREDICTED: 40S ribosomal protein S3-like A. carolinensis 100.0 242
NP_001168943.1 uncharacterized protein LOC100382757 Z. mays 100.0 242
NP_001232278.1 LOC100190284 gene product T. guttata 100.0 242
XP_001086020.1 PREDICTED: 40S ribosomal protein S3 M. mulatta 100.0 242
XP_003910477.1 PREDICTED: 40S ribosomal protein S3 P. anubis 100.0 242
NP_001238928.1 40S ribosomal protein S3 P. troglodytes 100.0 242
XP_534008.1 PREDICTED: 40S ribosomal protein S3 isoform 1 C. lupus familiaris 100.0 242
XP_001494894.1 PREDICTED: 40S ribosomal protein S3-like E. caballus 100.0 242
NP_001038066.1 RPS3 gene product S. scrofa 100.0 242
NP_001029219.1 RPS3 gene product B. taurus 100.0 242
XP_004016377.1 PREDICTED: 40S ribosomal protein S3 O. aries 100.0 242
XP_002708735.1 PREDICTED: ribosomal protein S3-like O. cuniculus 100.0 242
NP_001094409.1 40S ribosomal protein S3-A X. laevis 99.6 245
NP_989119.1 rps3 gene product X. tropicalis 99.6 245
XP_004075224.1 PREDICTED: 40S ribosomal protein S3-like O. latipes 99.6 244
XP_003448999.1 PREDICTED: 40S ribosomal protein S3-like O. niloticus 99.6 244
NP_001026007.1 RPS3 gene product G. gallus 99.6 243
NP_957447.1 rps3 gene product D. rerio 99.2 244
NP_476632.1 ribosomal protein S3 D. melanogaster 91.4 244
XP_001699797.1 ribosomal protein S3, component of cytosolic 80S ribosome and 40S small subunit C. reinhardtii 89.1 229
NP_180719.1 40S ribosomal protein S3-1 A. thaliana 88.0 249
NP_498349.1 Protein RPS-3 C. elegans 85.0 245
XP_956174.2 40S ribosomal protein S3 N. crassa 81.3 261
NP_014221.3 ribosomal 40S subunit protein S3 S. cerevisiae 74.6 239
Other hits (2 of 49) [Show all]SpeciesId(%)Len(aa)
NP_001187068.1 40S ribosomal protein S3 I. punctatus 99.2 244
XP_002611703.1 hypothetical protein BRAFLDRAFT_56803 B. floridae 96.5 225

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: skin; lung; embryonic tissue; brain; pancreas; uncharacterized tissue; eye; ovary; intestine; mixed; placenta; liver; uterus; mammary gland; blood; prostate; lymph; stomach; muscle; kidney; cervix; testis; tonsil; bone marrow; lymph node; bone; ascites; spleen; pharynx; umbilical cord; connective tissue; heart; thyroid; vascular; thymus; bladder; pituitary gland; adrenal gland; parathyroid; salivary gland; nerve; mouth; ear; adipose tissue; esophagus; epididymis; trachea; spinal cord; larynx; amniotic fluid; peritoneum
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q13.3-q13.5
UniSTS entry: Chr 3 RH68863
UniSTS entry: Chr 11 RH35764
UniSTS entry: Chr 11 A005D09 [Map Viewer]
UniSTS entry: Chr 11 RH94000
UniSTS entry: Chr 15 PMC151001P2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (21)

U14990.1 Human XP1PO ribosomal protein S3 (rpS3) mRNA, complete cds P
U14991.1 Human XP2NE ribosomal protein S3 (rpS3) mRNA, complete cds P
U14992.1 Human IMR-90 ribosomal protein S3 (rpS3) mRNA, complete cds P
NM_001005.4 Homo sapiens ribosomal protein S3 (RPS3), transcript variant 1, mRNA PA
BC071917.1 Homo sapiens ribosomal protein S3, mRNA (cDNA clone MGC:88599 IMAGE:6297012), complete cds PA
S42658.1 S3 ribosomal protein [human, colon, mRNA, 826 nt] P
AK223048.1 Homo sapiens mRNA for ribosomal protein S3 variant, clone: KAT00103 PA
BC100284.1 Homo sapiens ribosomal protein S3, mRNA (cDNA clone MGC:117338 IMAGE:6160514), complete cds PA
BC003577.1 Homo sapiens, clone IMAGE:3544292, mRNA, partial cds PA
BC003137.1 Homo sapiens ribosomal protein S3, mRNA (cDNA clone MGC:3657 IMAGE:2906158), complete cds PA
BC013196.1 Homo sapiens, clone IMAGE:4347401, mRNA, partial cds PA
BC150501.1 Homo sapiens ribosomal protein S3, mRNA (cDNA clone IMAGE:40134452), partial cds P
AK313051.1 Homo sapiens cDNA, FLJ93526, Homo sapiens ribosomal protein S3 (RPS3), mRNA P
AB062288.1 Homo sapiens OK/SW-cl.26 mRNA for IMR-90 ribosomal protein S3, complete cds PA
BC034149.1 Homo sapiens ribosomal protein S3, mRNA (cDNA clone MGC:32779 IMAGE:4665438), complete cds PA
BC029981.1 Homo sapiens ribosomal protein S3, mRNA (cDNA clone IMAGE:4705217) PA
BC013231.1 Homo sapiens ribosomal protein S3, mRNA (cDNA clone IMAGE:3462987) PA
X55715.1 Human Hums3 mRNA for 40S ribosomal protein s3 P
NM_001256802.1 Homo sapiens ribosomal protein S3 (RPS3), transcript variant 2, mRNA PA
NM_001260507.1 Homo sapiens ribosomal protein S3 (RPS3), transcript variant 4, mRNA PA
NM_001260506.1 Homo sapiens ribosomal protein S3 (RPS3), transcript variant 3, mRNA PA

EST sequences (10 of 6443) [Show all sequences]

AA864764.1 Clone IMAGE:1460023 kidney 3' read PA
AA921708.1 Clone IMAGE:1457174 intestine 3' read A
AA961403.1 Clone IMAGE:1597858 uncharacterized tissue 3' read A
AA962312.1 Clone IMAGE:1569911 lung 3' read PA
R14448.1 Clone IMAGE:28931 brain 5' read P
AA989150.1 Clone IMAGE:1593506 kidney 3' read
AA989615.1 Clone IMAGE:1577381 spleen 3' read PA
AA999764.1 Clone IMAGE:1612960 uncharacterized tissue 3' read A
AI014737.1 Clone IMAGE:1598756 uncharacterized tissue 3' read
AI014380.1 Clone IMAGE:1611211 uncharacterized tissue 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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