> Matrix metallopeptidase 16 (membrane-inserted) (MMP16)
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UGID:1382581     UniGene Hs.546267     Homo sapiens (human)   MMP16 Order cDNA clone, Links
Matrix metallopeptidase 16 (membrane-inserted) (MMP16)

Human protein-coding gene MMP16. Represented by 45 ESTs from 28 cDNA libraries. Corresponds to reference sequence NM_005941.4. [UniGene 1382581 - Hs.546267]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001084206.1 PREDICTED: matrix metalloproteinase-16-like isoform 2 M. mulatta 100.0 606
XP_001136497.1 PREDICTED: matrix metalloproteinase-16 isoform 2 P. troglodytes 100.0 606
NP_005932.2 MMP16 gene product H. sapiens 100.0 606
XP_544165.3 PREDICTED: matrix metalloproteinase-16 C. lupus familiaris 99.5 606
NP_062698.2 Mmp16 gene product M. musculus 98.2 606
NP_001085262.1 matrix metallopeptidase 16 (membrane-inserted) precursor X. laevis 88.1 612
XP_700781.5 PREDICTED: matrix metalloproteinase-16 D. rerio 77.2 579
Other hits (2 of 25) [Show all]SpeciesId(%)Len(aa)
XP_002710723.1 PREDICTED: matrix metalloproteinase 16 O. cuniculus 99.3 606
XP_001926652.1 PREDICTED: matrix metalloproteinase-16 S. scrofa 99.2 606

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; vascular; stomach; embryonic tissue; eye; placenta; muscle; skin; prostate; kidney; heart; lung; mouth; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 8
Map position: 8q21.3
UniSTS entry: Chr 8 D8S1404E
UniSTS entry: Chr 8 A008X11
UniSTS entry: Chr 8 AB021228
UniSTS entry: Chr 8 WI-21150 [Map Viewer]
UniSTS entry: Chr 8 D5Wox36
UniSTS entry: Chr 8 MMP16_920
UniSTS entry: RH44386
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

NM_005941.4 Homo sapiens matrix metallopeptidase 16 (membrane-inserted) (MMP16), mRNA PA
BC069500.1 Homo sapiens matrix metallopeptidase 16 (membrane-inserted), mRNA (cDNA clone MGC:97171 IMAGE:7262415), complete cds P
BC075005.2 Homo sapiens matrix metallopeptidase 16 (membrane-inserted), mRNA (cDNA clone MGC:104153 IMAGE:30915613), complete cds P
BC075004.2 Homo sapiens matrix metallopeptidase 16 (membrane-inserted), mRNA (cDNA clone MGC:103992 IMAGE:30915400), complete cds P
D83646.1 Homo sapiens mRNA for metalloproteinase, complete cds P
D83647.1 Homo sapiens mRNA for metalloproteinase, complete cds P
AK314274.1 Homo sapiens cDNA, FLJ95028, Homo sapiens matrix metalloproteinase 16 (membrane-inserted)(MMP16), transcript variant 1, mRNA P
AL832595.1 Homo sapiens mRNA; cDNA DKFZp451M0916 (from clone DKFZp451M0916) PA
U79292.1 Human clone 23734 mRNA sequence A
D85511.1 Homo sapiens mRNA for MT3-MMP, complete cds P
AB009303.1 Homo sapiens mRNA for membrane-type matrix metalloproteinase 3, complete cds P

EST sequences (10 of 45) [Show all sequences]

BX110784.1 Clone IMAGp998B20274_;_IMAGE:46916 brain
BX105635.1 Clone IMAGp998H154471_;_IMAGE:1759166 placenta
AI192539.1 Clone IMAGE:1743924 lung 3' read
AI207302.1 Clone IMAGE:1759166 placenta 3' read A
AA910744.1 Clone IMAGE:1524443 mixed 3' read
R40485.1 Clone IMAGE:27919 brain 3' read A
AW008441.1 Clone IMAGE:2533444 stomach 3' read
Z46014.1 Clone c-18d02 brain
Z39369.1 Clone c-18d02 brain 3' read
CD556262.1 Clone IMAGE:30405379 vascular 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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