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UGID:1382575     UniGene Hs.546261     Homo sapiens (human)   HNRNPA1
Heterogeneous nuclear ribonucleoprotein A1 (HNRNPA1)

Human protein-coding gene HNRNPA1. Represented by 3904 ESTs from 674 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 1382575 - Hs.546261]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001034218.1 Hnrnpa1 gene product M. musculus 100.0 372
NP_001229438.1 heterogeneous nuclear ribonucleoprotein A1 E. caballus 100.0 372
XP_004006329.1 PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform 3 O. aries 100.0 372
NP_112420.1 HNRNPA1 gene product H. sapiens 100.0 371
XP_003916925.1 PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform 1 P. anubis 100.0 350
NP_058944.1 Hnrnpa1 gene product R. norvegicus 100.0 319
XP_001082949.1 PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform 3 M. mulatta 100.0 319
NP_001091892.1 heterogeneous nuclear ribonucleoprotein A1-like 1 P. troglodytes 100.0 319
XP_848386.1 PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform 2 C. lupus familiaris 100.0 319
NP_001070686.1 HNRNPA1 gene product S. scrofa 100.0 319
NP_001039376.1 HNRNPA1 gene product B. taurus 100.0 319
NP_001081282.1 heterogeneous nuclear ribonucleoproteins A1 homolog X. laevis 88.5 364
NP_956789.1 zgc:66127 gene product D. rerio 80.9 387
NP_733250.1 heterogeneous nuclear ribonucleoprotein at 98DE, isoform E D. melanogaster 57.7 345
NP_001040945.1 Protein HRP-1, isoform d C. elegans 54.0 341
Other hits (2 of 30) [Show all]SpeciesId(%)Len(aa)
XP_002711081.1 PREDICTED: heterogeneous nuclear ribonucleoprotein A1 O. cuniculus 99.5 370
XP_003216717.1 PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like A. carolinensis 95.2 353

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; uncharacterized tissue; testis; intestine; lung; uterus; placenta; liver; prostate; eye; skin; kidney; pancreas; ovary; blood; mixed; muscle; stomach; heart; pharynx; mammary gland; thymus; cervix; bone; ascites; lymph; connective tissue; ear; bone marrow; spleen; lymph node; tonsil; adrenal gland; thyroid; bladder; trachea; salivary gland; larynx; esophagus; parathyroid; vascular; mouth; pituitary gland; nerve; ganglia; umbilical cord; adipose tissue; epididymis; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q13.1
UniSTS entry: Chr 12 SHGC-2501
UniSTS entry: Chr 15 PMC137566P1
UniSTS entry: Chr 12 D12S1994
UniSTS entry: Chr 11 REN98749
UniSTS entry: Chr 15 D6S2322
UniSTS entry: Chr 11 REN98750
UniSTS entry: RH68254
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (28)

BC052296.1 Homo sapiens heterogeneous nuclear ribonucleoprotein A1, mRNA (cDNA clone MGC:59854 IMAGE:6297642), complete cds PA
AK129814.1 Homo sapiens cDNA FLJ26303 fis, clone DMC07819, highly similar to HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1 P
NM_002136.2 Homo sapiens heterogeneous nuclear ribonucleoprotein A1 (HNRNPA1), transcript variant 1, mRNA PA
BC070315.1 Homo sapiens heterogeneous nuclear ribonucleoprotein A1, mRNA (cDNA clone MGC:88317 IMAGE:4101267), complete cds PA
BC071945.1 Homo sapiens heterogeneous nuclear ribonucleoprotein A1, mRNA (cDNA clone MGC:88632 IMAGE:5475712), complete cds PA
BC073162.1 Homo sapiens heterogeneous nuclear ribonucleoprotein A1, mRNA (cDNA clone MGC:87898 IMAGE:6154972), complete cds PA
BC074502.1 Homo sapiens heterogeneous nuclear ribonucleoprotein A1, mRNA (cDNA clone MGC:65152 IMAGE:3455742), complete cds PA
BC078165.1 Homo sapiens heterogeneous nuclear ribonucleoprotein A1, mRNA (cDNA clone IMAGE:6179438), with apparent retained intron PA
X06747.1 Human hnRNP core protein A1 P
BC103707.1 Homo sapiens heterogeneous nuclear ribonucleoprotein A1, mRNA (cDNA clone MGC:102835 IMAGE:6154800), complete cds PA
BC104236.1 Homo sapiens heterogeneous nuclear ribonucleoprotein A1, mRNA (cDNA clone IMAGE:40033043), partial cds P
BC104237.1 Homo sapiens heterogeneous nuclear ribonucleoprotein A1, mRNA (cDNA clone IMAGE:40033044), partial cds P
BC002355.2 Homo sapiens heterogeneous nuclear ribonucleoprotein A1, mRNA (cDNA clone MGC:8473 IMAGE:2821751), complete cds PA
BC121133.2 Homo sapiens heterogeneous nuclear ribonucleoprotein A1, mRNA (cDNA clone MGC:150453 IMAGE:40120894), complete cds P
BC004945.1 Homo sapiens, clone IMAGE:3615335, mRNA, partial cds PA
NM_031157.2 Homo sapiens heterogeneous nuclear ribonucleoprotein A1 (HNRNPA1), transcript variant 2, mRNA PA
BC012158.1 Homo sapiens heterogeneous nuclear ribonucleoprotein A1, mRNA (cDNA clone MGC:20389 IMAGE:4564655), complete cds PA
BC009600.1 Homo sapiens heterogeneous nuclear ribonucleoprotein A1, mRNA (cDNA clone MGC:14692 IMAGE:4134638), complete cds PA
AK291113.1 Homo sapiens cDNA FLJ75550 complete cds, highly similar to Homo sapiens heterogeneous nuclear ribonucleoprotein A1 (HNRPA1), transcript variant 1, mRNA P
AK308679.1 Homo sapiens cDNA, FLJ98720 P
BC033714.1 Homo sapiens heterogeneous nuclear ribonucleoprotein A1, mRNA (cDNA clone MGC:45574 IMAGE:4420039), complete cds PA
AK298176.1 Homo sapiens cDNA FLJ51587 complete cds, highly similar to Heterogeneous nuclear ribonucleoprotein A1 PA
AK303303.1 Homo sapiens cDNA FLJ51586 complete cds, moderately similar to Heterogeneous nuclear ribonucleoprotein A1 P
BC020442.2 Homo sapiens heterogeneous nuclear ribonucleoprotein A1, mRNA (cDNA clone IMAGE:3447644) PA
X79536.1 H.sapiens mRNA for hnRNPcore protein A1 P
BC035253.1 Homo sapiens, Similar to heterogeneous nuclear ribonucleoprotein A1, clone IMAGE:4754686, mRNA PA
U00947.1 Human clone C4E 3.2 (CAC)n/(GTG)n repeat-containing mRNA P
X04347.1 Human liver mRNA fragment DNA binding protein UPI homologue (C-terminus) P

EST sequences (10 of 3904) [Show all sequences]

AA954200.1 Clone IMAGE:1575094 kidney 3' read
AA908273.1 Clone IMAGE:1441638 mammary gland 3' read A
AA961982.1 Clone IMAGE:1592210 kidney 3' read A
AA961996.1 Clone IMAGE:1592227 kidney 3' read A
AA962203.1 Clone IMAGE:1553502 kidney 3' read A
AA970566.1 Clone IMAGE:1574830 kidney 3' read
AA970875.1 Clone IMAGE:1576558 intestine 3' read A
AA972566.1 Clone IMAGE:1584731 lung 3' read A
AA973993.1 Clone IMAGE:1586146 uncharacterized tissue 3' read A
AA975528.1 Clone IMAGE:1558230 lung 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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