> Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
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UGID:1380891     UniGene Hs.544577     Homo sapiens (human)   GAPDH Order cDNA clone, Links
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)

Human protein-coding gene GAPDH. Represented by 14996 ESTs from 882 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 1380891 - Hs.544577]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_508955.1 PREDICTED: glyceraldehyde-3-phosphate dehydrogenase isoform 5 P. troglodytes 100.0 334
NP_002037.2 GAPDH gene product H. sapiens 100.0 334
XP_001105471.1 PREDICTED: glyceraldehyde-3-phosphate dehydrogenase M. mulatta 99.7 334
XP_003905906.1 PREDICTED: glyceraldehyde-3-phosphate dehydrogenase P. anubis 99.7 334
XP_001476757.1 PREDICTED: glyceraldehyde-3-phosphate dehydrogenase-like isoform 2 M. musculus 99.1 332
NP_001108586.1 gapdh gene product D. rerio 92.2 332
NP_001080567.1 glyceraldehyde-3-phosphate dehydrogenase X. laevis 91.6 332
NP_508535.1 Protein GPD-2 C. elegans 88.3 340
NP_525091.1 glyceraldehyde 3 phosphate dehydrogenase 2, isoform B D. melanogaster 87.3 331
XP_956977.1 glyceraldehyde 3-phosphate dehydrogenase N. crassa 82.5 337
NP_172801.1 glyceraldehyde 3-phosphate dehydrogenase A. thaliana 78.7 334
NP_011708.3 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) TDH3 S. cerevisiae 77.0 331
XP_001703199.1 glyceraldehyde 3-phosphate dehydrogenase, dominant splicing variant C. reinhardtii 75.7 370
Other hits (2 of 63) [Show all]SpeciesId(%)Len(aa)
XP_001062726.1 PREDICTED: glyceraldehyde-3-phosphate dehydrogenase-like R. norvegicus 97.6 332
NP_001193288.1 GAPDH gene product S. scrofa 97.0 331

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; skin; lung; embryonic tissue; eye; uterus; placenta; ovary; uncharacterized tissue; intestine; pancreas; testis; lymph; mammary gland; liver; kidney; prostate; blood; cervix; muscle; stomach; tonsil; lymph node; salivary gland; bone; larynx; heart; mixed; ascites; adrenal gland; connective tissue; epididymis; bladder; nerve; mouth; bone marrow; esophagus; pituitary gland; pineal gland; amniotic fluid; umbilical cord; vascular; thyroid; spleen; pharynx; parathyroid; thymus; adipose tissue; peritoneum; ganglia; ear
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12p13
UniSTS entry: Chr 5 PMC150665P1
UniSTS entry: Chr 1 PMC153210P3
UniSTS entry: Chr 12 PMC86881P1
UniSTS entry: Chr 15 PMC112827P1
UniSTS entry: Chr X PMC112330P1
UniSTS entry: Chr 3 PMC102702P1
UniSTS entry: Chr 3 PMC351321P5
UniSTS entry: Chr 1 GDB:376732
UniSTS entry: Chr 1 PMC128235P1
UniSTS entry: Chr 1 PMC329392P1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (32)

BT006893.1 Homo sapiens glyceraldehyde-3-phosphate dehydrogenase mRNA, complete cds P
NM_002046.4 Homo sapiens glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 1, mRNA PA
CR407671.1 Homo sapiens full open reading frame cDNA clone RZPDo834B103D for gene GAPD, glyceraldehyde-3-phosphate dehydrogenase complete cds, without stopcodon P
M17851.1 Human glyceraldehyde-3-phosphate dehydrogenase mRNA, complete cds P
J02642.1 Human glyceraldehyde 3-phosphate dehydrogenase mRNA P
M33197.1 Human glyceraldehyde-3-phosphate dehydrogenase (GAPDH) mRNA, complete cds P
BC083511.1 Homo sapiens glyceraldehyde-3-phosphate dehydrogenase, mRNA (cDNA clone MGC:88685 IMAGE:3536969), complete cds PA
AJ844644.1 Homo sapiens partial mRNA for glyceraldehyde-3-phosphate dehydrogenase (GAPD gene), 5' end
AK026525.1 Homo sapiens cDNA: FLJ22872 fis, clone KAT02551, highly similar to HUMGAPDH Human glyceraldehyde-3-phosphate dehydrogenase (GAPDH) mRNA PA
AY007133.1 Homo sapiens clone CDABP0047 mRNA sequence PA
AF261085.1 Homo sapiens glyceraldehyde-3-phosphate dehydrogenase (GADPH) mRNA, complete cds P
AY633612.1 Homo sapiens aging-associated gene 9 protein mRNA, complete cds P
BC001601.1 Homo sapiens glyceraldehyde-3-phosphate dehydrogenase, mRNA (cDNA clone MGC:2031 IMAGE:3543589), complete cds PA
BC004109.2 Homo sapiens glyceraldehyde-3-phosphate dehydrogenase, mRNA (cDNA clone MGC:11042 IMAGE:3678259), complete cds PA
BC009081.1 Homo sapiens glyceraldehyde-3-phosphate dehydrogenase, mRNA (cDNA clone MGC:9901 IMAGE:3869809), complete cds PA
EF036498.1 Homo sapiens glyceraldehyde 3-phosphate dehydrogenase mRNA, partial cds P
BC013310.2 Homo sapiens glyceraldehyde-3-phosphate dehydrogenase, mRNA (cDNA clone MGC:4765 IMAGE:3538383), complete cds PA
AK308198.1 Homo sapiens cDNA, FLJ98146 P
BC025925.1 Homo sapiens glyceraldehyde-3-phosphate dehydrogenase, mRNA (cDNA clone MGC:15497 IMAGE:2989348), complete cds PA
BC026907.1 Homo sapiens glyceraldehyde-3-phosphate dehydrogenase, mRNA (cDNA clone MGC:25010 IMAGE:4454083), complete cds PA
AB062273.1 Homo sapiens OK/SW-cl.12 mRNA for glyceraldehyde-3-phosphate dehydrogenase, complete cds PA
BC029618.1 Homo sapiens glyceraldehyde-3-phosphate dehydrogenase, mRNA (cDNA clone MGC:9949 IMAGE:3876535), complete cds PA
AK299448.1 Homo sapiens cDNA FLJ58855 complete cds, highly similar to Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) PA
X01677.1 Human liver mRNA for glyceraldehyde-3-phosphate dehydrogenase (G3PD, EC 1.2.1.12) P
BC029340.1 Homo sapiens glyceraldehyde-3-phosphate dehydrogenase, mRNA (cDNA clone IMAGE:3917859) PA
BC020308.1 Homo sapiens glyceraldehyde-3-phosphate dehydrogenase, mRNA (cDNA clone IMAGE:4938218) PA
M36164.1 Human glyceraldehyde-3-phosphate dehydrogenase mRNA, 3' flank A
X53778.1 H.sapiens hng mRNA for uracil DNA glycosylase PA
U34995.1 Human normal keratinocyte substraction library mRNA, clone H22a, complete sequence P
HQ727992.1 Homo sapiens clone MVRG GAPDH glyceraldehyde-3-phosphate dehydrogenase mRNA, partial cds
NM_001256799.1 Homo sapiens glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 2, mRNA PA
BC023632.2 Homo sapiens glyceraldehyde-3-phosphate dehydrogenase, mRNA (cDNA clone MGC:23503 IMAGE:4842418), complete cds PA

EST sequences (10 of 14996) [Show all sequences]

AA961337.1 Clone IMAGE:1599456 uncharacterized tissue 3' read A
AA961538.1 Clone IMAGE:1592553 kidney 3' read A
AA961945.1 Clone IMAGE:1593790 kidney 3' read A
AA886868.1 Clone IMAGE:1493248 kidney 3' read A
AA922337.1 Clone IMAGE:1486284 mouth 3' read A
AA926821.1 Clone IMAGE:1486494 mouth 3' read P
AA970888.1 Clone IMAGE:1572650 kidney 3' read A
AA973802.1 Clone IMAGE:1569175 lung 3' read A
AA973850.1 Clone IMAGE:1586080 uncharacterized tissue 3' read A
AA976420.1 Clone IMAGE:1589843 kidney 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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