Radial spoke head 9 homolog (Chlamydomonas) (RSPH9)

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UGID:1370899 UniGene Hs.534585 Homo sapiens (human) RSPH9

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Radial spoke head 9 homolog (Chlamydomonas) (RSPH9)

Human protein-coding gene RSPH9. Represented by 60 ESTs from 33 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 1370899 - Hs.534585]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_001180270.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	RSPH9 gene product	H. sapiens	100.0	305
XP_001089585.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: radial spoke head protein 9 homolog	M. mulatta	100.0	144
NP_083614.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Rsph9 gene product	M. musculus	93.1	275
NP_001025284.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	rsph9 gene product	D. rerio	57.0	276
Other hits (2 of 26) [Show all]		Species	Id(%)	Len(aa)
XP_003897703.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: radial spoke head protein 9 homolog	P. anubis	97.1	243
XP_001929549.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: radial spoke head protein 9 homolog	S. scrofa	95.7	275

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; mixed; eye; testis; placenta; embryonic tissue; umbilical cord; skin; pharynx; lung; ovary; liver; connective tissue; parathyroid; uncharacterized tissue

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	6
Map position:	6p21.1
UniSTS entry:	Chr 6	D6S1173E	[Map Viewer]
UniSTS entry:	Chr 6	WI-14320	[Map Viewer]

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

BC029519.1	Homo sapiens radial spoke head 9 homolog (Chlamydomonas), mRNA (cDNA clone MGC:33840 IMAGE:5296237), complete cds	PA
NM_152732.4	Homo sapiens radial spoke head 9 homolog (Chlamydomonas) (RSPH9), transcript variant 1, mRNA	PA
NM_001193341.1	Homo sapiens radial spoke head 9 homolog (Chlamydomonas) (RSPH9), transcript variant 2, mRNA	P

EST sequences (10 of 60) [Show all sequences]

AI004786.1	Clone IMAGE:1626104	mixed	3' read	P
AI190974.1	Clone IMAGE:1739212	lung	3' read	P
AI220270.1	Clone IMAGE:1840810	mixed	3' read	P
AA835058.1	Clone IMAGE:1393737	testis	3' read	PA
AI382131.1	Clone IMAGE:2087411	mixed	3' read	P
AI424995.1	Clone IMAGE:2112182	mixed	3' read	P
R20520.1	Clone IMAGE:26243	brain	3' read
AI809322.1	Clone IMAGE:2348924	mixed	3' read	A
BX282751.1	Clone IMAGp998E215829_;_IMAGE:2348924	mixed		P
BX357147.2	Clone CS0DI022YC16	placenta	3' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria