> Thyroid hormone receptor interactor 6 (TRIP6)
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UGID:1370674     UniGene Hs.534360     Homo sapiens (human)   TRIP6 Order cDNA clone, Links
Thyroid hormone receptor interactor 6 (TRIP6)

Human protein-coding gene TRIP6. Represented by 616 ESTs from 252 cDNA libraries. Corresponds to reference sequence NM_003302.2. [UniGene 1370674 - Hs.534360]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_003293.2 TRIP6 gene product H. sapiens 100.0 475
NP_001233552.1 TRIP6 gene product P. troglodytes 99.8 475
NP_035769.1 Trip6 gene product M. musculus 93.1 479
NP_001245430.1 zyxin, isoform H D. melanogaster 70.0 210
NP_001090015.1 LIM domain containing preferred translocation partner in lipoma X. laevis 65.7 393
XP_001922831.2 PREDICTED: thyroid receptor-interacting protein 6-like D. rerio 65.5 570
NP_496777.2 Protein ZYX-1, isoform b C. elegans 54.4 192
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
XP_003919630.1 PREDICTED: LOW QUALITY PROTEIN: thyroid receptor-interacting protein 6 P. anubis 99.4 475
XP_001105778.2 PREDICTED: solute carrier family 12 member 9-like isoform 5 M. mulatta 97.5 555

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; embryonic tissue; skin; placenta; mixed; intestine; uterus; eye; cervix; uncharacterized tissue; ovary; prostate; liver; kidney; pancreas; testis; bone marrow; salivary gland; stomach; bone; adrenal gland; pharynx; heart; trachea; bladder; ascites; mammary gland; blood; ear; thyroid; muscle; lymph node; connective tissue; mouth; thymus; larynx; lymph; ganglia; adipose tissue; vascular; epididymis; spleen; esophagus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7q22
UniSTS entry: Chr 7 A002D09
UniSTS entry: Chr 7 SHGC-30159 [Map Viewer]
UniSTS entry: Chr 1 L17971
UniSTS entry: Chr 1 L17877
UniSTS entry: Chr 1 D10S512
UniSTS entry: Chr 1 D1S1425
UniSTS entry: Chr 1 D11S3114
UniSTS entry: Chr 1 D10S16
UniSTS entry: Chr 1 D8S2279
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (17)

BC002680.2 Homo sapiens thyroid hormone receptor interactor 6, mRNA (cDNA clone MGC:3837 IMAGE:3610413), complete cds PA
BC004999.1 Homo sapiens thyroid hormone receptor interactor 6, mRNA (cDNA clone MGC:4423 IMAGE:2958142), complete cds PA
BC004249.1 Homo sapiens thyroid hormone receptor interactor 6, mRNA (cDNA clone MGC:10556 IMAGE:3621877), complete cds PA
L40374.1 Homo sapiens thyroid receptor interactor (TRIP6) mRNA, 3' end of cds P
BC021540.1 Homo sapiens thyroid hormone receptor interactor 6, mRNA (cDNA clone MGC:10558 IMAGE:3622017), complete cds PA
AK291906.1 Homo sapiens cDNA FLJ77345 complete cds, highly similar to Homo sapiens thyroid hormone receptor interactor 6 (TRIP6), mRNA P
AK309312.1 Homo sapiens cDNA, FLJ99353 P
BC028985.1 Homo sapiens thyroid hormone receptor interactor 6, mRNA (cDNA clone MGC:29959 IMAGE:5122169), complete cds PA
AK093437.1 Homo sapiens cDNA FLJ36118 fis, clone TESTI2022495
NM_003302.2 Homo sapiens thyroid hormone receptor interactor 6 (TRIP6), mRNA PA
AB628088.1 Homo sapiens TRIP6i4 mRNA for thyroid hormone receptor interacting protein 6 isoform 4, complete cds P
AB628087.1 Homo sapiens TRIP6i3 mRNA for thyroid hormone receptor interacting protein 6 isoform 3, complete cds P
AB628086.1 Homo sapiens TRIP6i2 mRNA for thyroid hormone receptor interacting protein 6 isoform 2, complete cds P
AB628085.1 Homo sapiens TRIP6i1 mRNA for thyroid hormone receptor interacting protein 6 isoform 1, complete cds P
AF000974.1 Human zyxin related protein ZRP-1 mRNA, complete cds PA
AJ001902.1 Homo sapiens mRNA for TRIP6 (thyroid receptor interacting protein) PA
AF025437.1 Homo sapiens Opa-interacting protein OIP1 mRNA, partial cds PA

EST sequences (10 of 616) [Show all sequences]

AA971083.1 Clone IMAGE:1582227 mixed 3' read P
AA972082.1 Clone IMAGE:1582788 mixed 3' read
AA983236.1 Clone IMAGE:1591928 kidney 3' read PA
AA886419.1 Clone IMAGE:1501896 kidney 3' read
AA910237.1 Clone IMAGE:1520822 kidney 3' read
AI003409.1 Clone IMAGE:1414824 spleen 3' read
R17820.1 Clone IMAGE:31975 brain 5' read
AI024448.1 Clone IMAGE:1641713 testis 3' read
AI040957.1 Clone IMAGE:1641025 testis 3' read PA
AI073912.1 Clone IMAGE:1632304 mammary gland 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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