> Transmembrane and coiled-coil domains 6 (TMCO6)
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UGID:1370647     UniGene Hs.534333     Homo sapiens (human)   TMCO6 Order cDNA clone, Links
Transmembrane and coiled-coil domains 6 (TMCO6)

Human protein-coding gene TMCO6. Represented by 171 ESTs from 117 cDNA libraries. Corresponds to reference sequence NM_018502.3. [UniGene 1370647 - Hs.534333]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_060972.3 TMCO6 gene product H. sapiens 100.0 492
NP_082312.3 Tmco6 gene product M. musculus 87.5 490
NP_001083006.1 zgc:162240 gene product D. rerio 51.1 470
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_001140277.1 PREDICTED: transmembrane and coiled-coil domain-containing protein 6 isoform 1 P. troglodytes 99.2 498
XP_003900271.1 PREDICTED: transmembrane and coiled-coil domain-containing protein 6 isoform 2 P. anubis 98.2 498

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; uncharacterized tissue; lung; placenta; pituitary gland; mixed; blood; ovary; mammary gland; cervix; heart; liver; embryonic tissue; uterus; spinal cord; intestine; adrenal gland; skin; pancreas; bladder; adipose tissue; connective tissue; spleen; esophagus; trachea; thymus; stomach; lymph; kidney; eye; muscle; nerve; bone; prostate; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5q31.3
UniSTS entry: Chr 5 RH78253 [Map Viewer]
UniSTS entry: Chr 5 A010A06 [Map Viewer]
UniSTS entry: Chr 5 G33038
UniSTS entry: Chr 5 SGC31896 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

BC065828.1 Homo sapiens hypothetical protein PRO1580, mRNA (cDNA clone IMAGE:30387700), partial cds PA
NM_018502.3 Homo sapiens transmembrane and coiled-coil domains 6 (TMCO6), mRNA PA
BC001910.1 Homo sapiens transmembrane and coiled-coil domains 6, mRNA (cDNA clone MGC:2658 IMAGE:3538001), complete cds PA
BC009618.1 Homo sapiens transmembrane and coiled-coil domains 6, mRNA (cDNA clone MGC:16922 IMAGE:3901182), complete cds PA
AK289495.1 Homo sapiens cDNA FLJ76696 complete cds PA
AK308722.1 Homo sapiens cDNA, FLJ98763 P
AK097088.1 Homo sapiens cDNA FLJ39769 fis, clone SPLEN2000874 P
AK301502.1 Homo sapiens cDNA FLJ60921 complete cds P

EST sequences (10 of 171) [Show all sequences]

AI016388.1 Clone IMAGE:1641666 testis 3' read A
AI073333.1 Clone IMAGE:1632322 mammary gland 3' read A
AI078310.1 Clone IMAGE:1675095 mixed 3' read A
CB164361.1 Clone L17N670205n1-39-H03 liver 5' read P
CB157843.1 Clone L18POOL1n1-4-H04 liver 5' read P
AI347642.1 Clone IMAGE:1916712 kidney 3' read A
AI308117.1 Clone IMAGE:2055186 kidney 3' read A
AI307657.1 Clone IMAGE:2055530 kidney 3' read A
R57097.1 Clone F0553 heart 5' read
Z32873.1 Clone HEA28N heart


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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