> Nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (NFATC1)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:1350811     UniGene Hs.534074     Homo sapiens (human)   NFATC1 Order cDNA clone, Links
Nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (NFATC1)

Human protein-coding gene NFATC1. Represented by 147 ESTs from 70 cDNA libraries. Corresponds to 5 reference sequences (different isoforms). [UniGene 1350811 - Hs.534074]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_765975.1 NFATC1 gene product H. sapiens 100.0 929
NP_001157582.1 Nfatc1 gene product M. musculus 92.3 938
NP_001085919.1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 X. laevis 84.0 662
NP_001038624.1 nfatc1 gene product D. rerio 71.9 865
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_001088054.1 PREDICTED: nuclear factor of activated T-cells, cytoplasmic 1 isoform 2 M. mulatta 98.8 929
XP_003914560.1 PREDICTED: nuclear factor of activated T-cells, cytoplasmic 1-like isoform 1 P. anubis 98.7 470

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; uncharacterized tissue; lymph node; pancreas; embryonic tissue; brain; heart; kidney; mouth; testis; lung; parathyroid; thymus; prostate; ovary; intestine; uterus; placenta; tonsil; eye; connective tissue; bladder; spleen; mammary gland; blood; salivary gland; bone; cervix; vascular
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 18
Map position: 18q23
UniSTS entry: Chr 18 RH91458
UniSTS entry: Chr 18 STS-U08015
UniSTS entry: Chr 18 D18S1221 [Map Viewer]
UniSTS entry: Chr 18 GDB:555590
UniSTS entry: Chr 18 SHGC-132069
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (25)

NM_172390.1 Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (NFATC1), transcript variant 1, mRNA P
NM_172389.1 Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (NFATC1), transcript variant 5, mRNA PA
NM_172388.1 Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (NFATC1), transcript variant 4, mRNA PA
NM_172387.1 Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (NFATC1), transcript variant 3, mRNA PA
U80917.1 Homo sapiens transcription factor (NF-ATc/B) mRNA, complete cds PA
U80918.1 Homo sapiens transcription factor (NF-ATc/C) mRNA, complete cds PA
U80919.1 Homo sapiens transcription factor (NF-ATc/D) mRNA, complete cds PA
NM_006162.3 Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (NFATC1), transcript variant 2, mRNA PA
BC104753.1 Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1, mRNA (cDNA clone MGC:132413 IMAGE:8143756), complete cds P
BC112243.1 Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1, transcript variant 1, mRNA (cDNA clone MGC:138448 IMAGE:8327711), complete cds P
AK292641.1 Homo sapiens cDNA FLJ76687 complete cds, highly similar to Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (NFATC1), transcript variant 1, mRNA PA
U59736.1 Human transcription factor (NFATc.b) mRNA, complete cds P
AK309546.1 Homo sapiens cDNA, FLJ99587
BC033848.1 Homo sapiens, clone IMAGE:4480259, mRNA A
AK293760.1 Homo sapiens cDNA FLJ61216 complete cds, highly similar to Nuclear factor of activated T-cells, cytoplasmic 1 P
EU887566.1 Homo sapiens nuclear factor of activated T-cells c1 isoform IB-VIII (NFATC1) mRNA, complete cds, alternatively spliced PA
EU887565.1 Homo sapiens nuclear factor of activated T-cells c1 isoform IA-VIII (NFATC1) mRNA, complete cds, alternatively spliced PA
EU887564.1 Homo sapiens nuclear factor of activated T-cells c1 isoform IB-IXS (NFATC1) mRNA, complete cds, alternatively spliced PA
EU887563.1 Homo sapiens nuclear factor of activated T-cells c1 isoform IA-IXS (NFATC1) mRNA, complete cds, alternatively spliced PA
EU887562.1 Homo sapiens nuclear factor of activated T-cells c1 isoform IB-deltaIX (NFATC1) mRNA, complete cds, alternatively spliced P
EU887561.1 Homo sapiens nuclear factor of activated T-cells c1 isoform IA-deltaIX (NFATC1) mRNA, complete cds, alternatively spliced P
EU887560.1 Homo sapiens nuclear factor of activated T-cells c1 isoform IB-IXL (NFATC1) mRNA, complete cds, alternatively spliced P
EU887559.1 Homo sapiens nuclear factor of activated T-cells c1 isoform IA-IXL (NFATC1) mRNA, complete cds, alternatively spliced P
BC143457.1 Homo sapiens cDNA clone IMAGE:9051965 P
U08015.1 Human NF-ATc mRNA, complete cds P

EST sequences (10 of 147) [Show all sequences]

AA902994.1 Clone IMAGE:1516885 uncharacterized tissue 3' read A
AI000887.1 Clone IMAGE:1609408 mammary gland 3' read A
AI004286.1 Clone IMAGE:1626012 mixed 3' read A
AI004842.1 Clone IMAGE:1620684 testis 3' read A
AI031545.1 Clone IMAGE:1650043 parathyroid 3' read A
AI051727.1 Clone IMAGE:1673829 mixed 3' read
AI092781.1 Clone IMAGE:1693096 heart 3' read P
AI094595.1 Clone IMAGE:1670613 brain 3' read A
AI125841.1 Clone IMAGE:1737728 testis 3' read P
AI167635.1 Clone IMAGE:1509017 mixed 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help