Ubiquitin specific peptidase like 1 (USPL1)

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UGID:1293206 UniGene Hs.533831 Homo sapiens (human) USPL1

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Ubiquitin specific peptidase like 1 (USPL1)

Human protein-coding gene USPL1. Represented by 232 ESTs from 125 cDNA libraries. Corresponds to reference sequence NM_005800.4. [UniGene 1293206 - Hs.533831]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_005791.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	USPL1 gene product	H. sapiens	100.0	1091
NP_001080836.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	high mobility group box 1	X. laevis	94.9	78
NP_001092721.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	high-mobility group box 1b	D. rerio	90.9	77
NP_001108625.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Uspl1 gene product	M. musculus	70.8	1085
Other hits (2 of 19) [Show all]		Species	Id(%)	Len(aa)
XP_522652.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: ubiquitin specific peptidase like 1	P. troglodytes	99.3	1092
XP_003913775.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: ubiquitin-specific peptidase-like protein 1	P. anubis	96.2	1092

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	testis; brain; intestine; vascular; prostate; adrenal gland; bone marrow; pharynx; placenta; connective tissue; mouth; mammary gland; heart; trachea; mixed; eye; liver; blood; skin; pancreas; lymph node; uncharacterized tissue; embryonic tissue; uterus; ovary; kidney; stomach; cervix; muscle; thymus; lung; bone; parathyroid

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	13
Map position:	13q12-q14
UniSTS entry:	Chr 13	SGC30739	[Map Viewer]
UniSTS entry:	Chr 13	STS-X59131
UniSTS entry:	Chr 1	GDB:434012

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

NM_005800.4	Homo sapiens ubiquitin specific peptidase like 1 (USPL1), mRNA	P
CR627370.1	Homo sapiens mRNA; cDNA DKFZp781K2286 (from clone DKFZp781K2286)	PA
AK057514.1	Homo sapiens cDNA FLJ32952 fis, clone TESTI2008081, highly similar to Homo sapiens D13S106 mRNA for a highly charged amino acid sequence	P
AK289826.1	Homo sapiens cDNA FLJ75211 complete cds, highly similar to Homo sapiens ubiquitin specific peptidase like 1, mRNA	P
X59131.1	Homo sapiens D13S106 mRNA for a highly charged amino acid sequence	P
AL832776.1	Homo sapiens mRNA; cDNA DKFZp686E147 (from clone DKFZp686E147)	PA
BC012594.1	Homo sapiens ubiquitin specific peptidase like 1, mRNA (cDNA clone IMAGE:4291657), with apparent retained intron	PA
BC036027.1	Homo sapiens ubiquitin specific peptidase like 1, mRNA (cDNA clone MGC:33089 IMAGE:5271146), complete cds	PA
BC038103.2	Homo sapiens ubiquitin specific peptidase like 1, mRNA (cDNA clone MGC:33088 IMAGE:4821753), complete cds	PA

EST sequences (10 of 232) [Show all sequences]

T05588.1	Clone HFBDC79	brain
AA991883.1	Clone IMAGE:1610557	uncharacterized tissue	3' read	A
AI091449.1	Clone IMAGE:1651449	mixed	3' read	A
CB130306.1	Clone L12JSHC0-6-D03	liver	5' read
AI223965.1	Clone IMAGE:2000671	lymph node	3' read	A
CB216080.1	Clone IMAGE:5937726	uterus	5' read	P
AI468024.1	Clone IMAGE:2148247	mixed	3' read	PA
AI623993.1	Clone IMAGE:2229603	pancreas	3' read	PA
AI690948.1	Clone IMAGE:2207660	uterus	3' read	P
AI690970.1	Clone IMAGE:2207684	uterus	3' read	PA

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria