> Rho guanine nucleotide exchange factor (GEF) 17 (ARHGEF17)
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UGID:1293094     UniGene Hs.533719     Homo sapiens (human)   ARHGEF17 Order cDNA clone, Links
Rho guanine nucleotide exchange factor (GEF) 17 (ARHGEF17)

Human protein-coding gene ARHGEF17. Represented by 210 ESTs from 128 cDNA libraries. Corresponds to reference sequence NM_014786.3. [UniGene 1293094 - Hs.533719]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_055601.2 ARHGEF17 gene product H. sapiens 100.0 2062
NP_001074585.1 rho guanine nucleotide exchange factor 17 M. musculus 90.8 2056
XP_003200462.1 PREDICTED: rho guanine nucleotide exchange factor 17 D. rerio 69.4 1034
Other hits (2 of 32) [Show all]SpeciesId(%)Len(aa)
XP_003952045.1 PREDICTED: LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 17, partial P. troglodytes 97.6 2293
XP_001115376.1 PREDICTED: rho guanine nucleotide exchange factor 17-like M. mulatta 96.9 2067

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; eye; intestine; mammary gland; uterus; embryonic tissue; skin; nerve; uncharacterized tissue; mixed; heart; testis; amniotic fluid; cervix; connective tissue; trachea; thyroid; placenta; ovary; liver; pancreas; prostate; epididymis; kidney; umbilical cord; vascular; adipose tissue; pineal gland; parathyroid; pituitary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q13.4
UniSTS entry: Chr 11 RH16016
UniSTS entry: Chr 11 WI-18441 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

NM_014786.3 Homo sapiens Rho guanine nucleotide exchange factor (GEF) 17 (ARHGEF17), mRNA PA
AF378754.1 Homo sapiens tumor endothelial marker 4 (TEM4) mRNA, complete cds PA
BC137228.1 Homo sapiens Rho guanine nucleotide exchange factor (GEF) 17, mRNA (cDNA clone MGC:168848 IMAGE:9021225), complete cds P
AK074500.1 Homo sapiens cDNA FLJ90019 fis, clone HEMBA1000745 P
AB002335.1 Homo sapiens mRNA for KIAA0337 gene, partial cds P

EST sequences (10 of 210) [Show all sequences]

AA961477.1 Clone IMAGE:1579682 mixed 3' read
AA970102.1 Clone IMAGE:1581733 mixed 3' read A
AI038035.1 Clone IMAGE:1657790 embryonic tissue 3' read A
AI038383.1 Clone IMAGE:1656997 mixed 3' read A
AI042098.1 Clone IMAGE:1664933 skin 3' read A
AI140089.1 Clone IMAGE:1694476 heart 3' read A
CB051747.1 Clone IMAGE:3289915 uncharacterized tissue 3' read A
CB051748.1 Clone IMAGE:3289915 uncharacterized tissue 5' read A
AI148532.1 Clone IMAGE:1714776 placenta 3' read A
AI312037.1 Clone IMAGE:1929142 lung 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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