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UGID:1292812     UniGene Hs.533437     Homo sapiens (human)   TCEB1
Transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) (TCEB1)

Human protein-coding gene TCEB1. Represented by 187 ESTs from 112 cDNA libraries. [UniGene 1292812 - Hs.533437]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_080732.1 transcription elongation factor B polypeptide 1 M. musculus 100.0 111
NP_072115.1 Tceb1 gene product R. norvegicus 100.0 111
XP_001378182.1 PREDICTED: transcription elongation factor B polypeptide 1-like M. domestica 100.0 111
XP_003219628.1 PREDICTED: transcription elongation factor B polypeptide 1-like A. carolinensis 100.0 111
XP_003977405.1 PREDICTED: transcription elongation factor B polypeptide 1-like T. rubripes 100.0 111
XP_002199345.1 PREDICTED: transcription elongation factor B polypeptide 1 isoform 1 T. guttata 100.0 111
NP_001002440.2 tceb1b gene product D. rerio 100.0 111
NP_001187980.1 transcription elongation factor b polypeptide 1 I. punctatus 100.0 111
XP_004081069.1 PREDICTED: transcription elongation factor B polypeptide 1-like O. latipes 100.0 111
XP_003443520.1 PREDICTED: transcription elongation factor B polypeptide 1-like O. niloticus 100.0 111
NP_001080128.1 transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) X. laevis 100.0 111
NP_001016420.1 tceb1 gene product X. tropicalis 100.0 111
NP_001007889.1 TCEB1 gene product G. gallus 100.0 111
XP_003205177.1 PREDICTED: transcription elongation factor B polypeptide 1-like M. gallopavo 100.0 111
XP_002805434.1 PREDICTED: transcription elongation factor B polypeptide 1-like isoform 10 M. mulatta 100.0 111
XP_003902922.1 PREDICTED: transcription elongation factor B polypeptide 1 isoform 1 P. anubis 100.0 111
NP_001238934.1 TCEB1 gene product P. troglodytes 100.0 111
NP_001191786.1 TCEB1 gene product H. sapiens 100.0 111
XP_535104.1 PREDICTED: transcription elongation factor B polypeptide 1 C. lupus familiaris 100.0 111
XP_001493068.2 PREDICTED: transcription elongation factor B polypeptide 1-like isoform 1 E. caballus 100.0 111
XP_003355080.1 PREDICTED: transcription elongation factor B polypeptide 1-like isoform 2 S. scrofa 100.0 111
NP_001039958.1 TCEB1 gene product B. taurus 100.0 111
XP_004011792.1 PREDICTED: transcription elongation factor B polypeptide 1 isoform 1 O. aries 100.0 111
XP_002710686.1 PREDICTED: elongin C isoform 1 O. cuniculus 100.0 111
NP_523794.1 elongin C, isoform B D. melanogaster 95.5 111
NP_497405.1 Protein ELC-1 C. elegans 79.8 108
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
XP_001649556.1 elongation factor SIII p15 subunit, putative A. aegypti 98.2 113
XP_309973.2 AGAP011535-PA A. gambiae 98.2 113

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; muscle; mixed; kidney; blood; skin; uncharacterized tissue; liver; pharynx; ovary; lung; intestine; salivary gland; tonsil; ear; eye; placenta; prostate; pancreas; embryonic tissue; heart; mammary gland; spleen; bone; uterus; stomach; lymph; lymph node; connective tissue; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 8q21.11
UniSTS entry: Chr 8 RH16001
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

BC013809.1 Homo sapiens transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C), mRNA (cDNA clone MGC:8963 IMAGE:3923736), complete cds PA
L34587.1 Homo sapiens RNA polymerase II elongation factor SIII, p15 subunit mRNA, complete cds P

EST sequences (10 of 187) [Show all sequences]

AA962774.1 Clone IMAGE:1573444 kidney 3' read P
AA974295.1 Clone IMAGE:1586786 uncharacterized tissue 3' read
AA975844.1 Clone IMAGE:1555554 kidney 3' read PA
AA995715.1 Clone IMAGE:1606765 kidney 3' read PA
AA885857.1 Clone IMAGE:1500402 lung 3' read PA
AI003331.1 Clone IMAGE:1685292 brain 3' read P
AI018025.1 Clone IMAGE:1642072 testis 3' read P
AI022010.1 Clone IMAGE:1651577 skin 3' read P
AI075173.1 Clone IMAGE:1673652 mixed 3' read PA
AI128969.1 Clone IMAGE:1663202 skin 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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