> Intraflagellar transport 43 homolog (Chlamydomonas) (IFT43)
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UGID:1281464     UniGene Hs.532626     Homo sapiens (human)   IFT43 Order cDNA clone, Links
Intraflagellar transport 43 homolog (Chlamydomonas) (IFT43)

Human protein-coding gene IFT43. Represented by 218 ESTs from 116 cDNA libraries. Corresponds to 5 reference sequences (different isoforms). [UniGene 1281464 - Hs.532626]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001162061.1 PREDICTED: intraflagellar transport protein 43 homolog isoform 4 P. troglodytes 100.0 212
NP_443105.2 IFT43 gene product H. sapiens 100.0 212
NP_001186772.1 Ift43 gene product M. musculus 84.4 205
NP_001089762.1 intraflagellar transport protein 43 homolog X. laevis 68.7 198
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_002805169.1 PREDICTED: uncharacterized protein C14orf179-like M. mulatta 99.0 207
XP_003902135.1 PREDICTED: intraflagellar transport protein 43 homolog P. anubis 97.1 173

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; pharynx; brain; lung; uncharacterized tissue; prostate; mammary gland; mixed; nerve; uterus; esophagus; pancreas; embryonic tissue; liver; skin; eye; heart; ovary; placenta; kidney; vascular; adrenal gland; spleen; connective tissue; adipose tissue; blood; ascites; bone; intestine; thyroid; parathyroid; muscle; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 14
Map position: 14q24.3
UniSTS entry: Chr 14 RH44406 [Map Viewer]
UniSTS entry: Chr 14 D14S1348
UniSTS entry: Chr 14 A009J27 [Map Viewer]
UniSTS entry: Chr 14 G32586
UniSTS entry: RH91428
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

BC042852.1 Homo sapiens chromosome 14 open reading frame 179, mRNA (cDNA clone IMAGE:5314613), with apparent retained intron PA
BC010436.1 Homo sapiens chromosome 14 open reading frame 179, mRNA (cDNA clone MGC:16028 IMAGE:3608220), complete cds PA
NM_052873.2 Homo sapiens intraflagellar transport 43 homolog (Chlamydomonas) (IFT43), transcript variant 1, mRNA PA
NM_001102564.1 Homo sapiens intraflagellar transport 43 homolog (Chlamydomonas) (IFT43), transcript variant 2, mRNA PA
AK302944.1 Homo sapiens cDNA FLJ57680 complete cds P
NM_001255995.1 Homo sapiens intraflagellar transport 43 homolog (Chlamydomonas) (IFT43), transcript variant 3, mRNA PA
NR_045665.1 Homo sapiens intraflagellar transport 43 homolog (Chlamydomonas) (IFT43), transcript variant 5, non-coding RNA P
NR_045664.1 Homo sapiens intraflagellar transport 43 homolog (Chlamydomonas) (IFT43), transcript variant 4, non-coding RNA P

EST sequences (10 of 218) [Show all sequences]

AA954427.1 Clone IMAGE:1563476 mixed 3' read A
AA954562.1 Clone IMAGE:1562353 mixed 3' read A
AA962553.1 Clone IMAGE:1553614 kidney 3' read P
AA973700.1 Clone IMAGE:1569094 lung 3' read
AA977682.1 Clone IMAGE:1558374 lung 3' read A
AA994800.1 Clone IMAGE:1631676 mammary gland 3' read A
AI015238.1 Clone IMAGE:1624089 embryonic tissue 3' read A
AI034248.1 Clone IMAGE:1646922 parathyroid 3' read A
AI091720.1 Clone IMAGE:1651139 mixed 3' read A
AI097448.1 Clone IMAGE:1704619 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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