> Cryptochrome 2 (photolyase-like) (CRY2)
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UGID:1272389     UniGene Hs.532491     Homo sapiens (human)   CRY2 Order cDNA clone, Links
Cryptochrome 2 (photolyase-like) (CRY2)

Human protein-coding gene CRY2. Represented by 613 ESTs from 169 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 1272389 - Hs.532491]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001160595.2 PREDICTED: cryptochrome-2 isoform 1 P. troglodytes 100.0 613
NP_066940.2 CRY2 gene product H. sapiens 100.0 613
XP_001113162.1 PREDICTED: cryptochrome-2-like M. mulatta 99.7 592
XP_003910033.1 PREDICTED: cryptochrome-2 P. anubis 99.7 592
NP_001106804.1 Cry2 gene product M. musculus 99.2 590
NP_001082139.1 cryptochrome 2a X. laevis 91.1 564
NP_571861.2 cry3 gene product D. rerio 86.1 574
XP_001698054.1 cryptochrome photoreceptor C. reinhardtii 63.7 490
NP_477188.1 (6-4)-photolyase, isoform B D. melanogaster 63.5 499
NP_566520.1 (6-4)DNA photolyase A. thaliana 57.3 501
Other hits (2 of 45) [Show all]SpeciesId(%)Len(aa)
XP_540761.2 PREDICTED: cryptochrome-2 C. lupus familiaris 99.5 592
XP_003122883.1 PREDICTED: cryptochrome-2 isoform 1 S. scrofa 98.8 593

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; embryonic tissue; trachea; thyroid; bladder; skin; blood; lymph node; ascites; mixed; uterus; uncharacterized tissue; placenta; adrenal gland; spleen; eye; mouth; lung; pancreas; connective tissue; thymus; pharynx; mammary gland; larynx; prostate; liver; muscle; intestine; heart; kidney; bone; nerve; bone marrow; ovary; pituitary gland; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11p11.2
UniSTS entry: Chr 11 BCD2335 [Map Viewer]
UniSTS entry: Chr 11 RH12593 [Map Viewer]
UniSTS entry: Cry2
UniSTS entry: Chr 11 D10Chm27
UniSTS entry: Chr 1 D11S3114
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AB014558.1 Homo sapiens mRNA for KIAA0658 protein, partial cds P
NM_021117.3 Homo sapiens cryptochrome 2 (photolyase-like) (CRY2), transcript variant 1, mRNA P
AK001194.1 Homo sapiens cDNA FLJ10332 fis, clone NT2RM2000636, highly similar to Homo sapiens mRNA for KIAA0658 protein
AK291260.1 Homo sapiens cDNA FLJ75050 complete cds, highly similar to Homo sapiens cryptochrome 2 (photolyase-like) (CRY2), mRNA P
NM_001127457.1 Homo sapiens cryptochrome 2 (photolyase-like) (CRY2), transcript variant 2, mRNA PA
AK302865.1 Homo sapiens cDNA FLJ54895 complete cds, highly similar to Homo sapiens cryptochrome 2 (photolyase-like) (CRY2), mRNA P
AK295627.1 Homo sapiens cDNA FLJ52645 complete cds, highly similar to Homo sapiens cryptochrome 2 (photolyase-like) (CRY2), mRNA P
AK294904.1 Homo sapiens cDNA FLJ53787 complete cds, highly similar to Homo sapiens cryptochrome 2 (photolyase-like) (CRY2), mRNA P
EU219622.1 Homo sapiens growth-inhibiting protein 37 mRNA, complete cds P
BC035161.1 Homo sapiens cryptochrome 2 (photolyase-like), mRNA (cDNA clone MGC:43304 IMAGE:5265444), complete cds PA
BC041814.1 Homo sapiens cryptochrome 2 (photolyase-like), mRNA (cDNA clone MGC:43402 IMAGE:5266781), complete cds PA

EST sequences (10 of 613) [Show all sequences]

AA988488.1 Clone IMAGE:1603026 lung 3' read
AA988558.1 Clone IMAGE:1602555 lung 3' read
AA992239.1 Clone IMAGE:1620378 testis 3' read
AI001751.1 Clone IMAGE:1619088 testis 3' read
AI078566.1 Clone IMAGE:1677556 mixed 3' read
AI081990.1 Clone IMAGE:1638016 mammary gland 3' read
AI091830.1 Clone IMAGE:1690966 mixed 3' read
AI093000.1 Clone IMAGE:1692451 heart 3' read
AA907235.1 Clone IMAGE:1522433 lung 3' read A
CB051597.1 Clone IMAGE:3289862 uncharacterized tissue 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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