> Ribosomal protein L5 (RPL5)
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UGID:1272257     UniGene Hs.532359     Homo sapiens (human)   RPL5 Order cDNA clone, Links
Ribosomal protein L5 (RPL5)

Human protein-coding gene RPL5. Represented by 3548 ESTs from 617 cDNA libraries. Corresponds to reference sequence NM_000969.3. [UniGene 1272257 - Hs.532359]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003892255.1 PREDICTED: 60S ribosomal protein L5 P. anubis 100.0 296
XP_003308262.1 PREDICTED: 60S ribosomal protein L5 isoform 1 P. troglodytes 100.0 296
NP_000960.2 RPL5 gene product H. sapiens 100.0 296
XP_537074.3 PREDICTED: 60S ribosomal protein L5 isoform 1 C. lupus familiaris 100.0 296
XP_002718329.1 PREDICTED: ribosomal protein L5-like O. cuniculus 100.0 296
NP_058676.1 Rpl5 gene product M. musculus 99.7 296
NP_112361.1 Rpl5 gene product R. norvegicus 99.7 296
NP_001030383.1 RPL5 gene product B. taurus 99.7 296
XP_004018480.1 PREDICTED: 60S ribosomal protein L5-like O. aries 99.7 296
NP_001075354.1 RPL5 gene product E. caballus 99.6 246
NP_001079377.1 60S ribosomal protein L5-A X. laevis 96.3 295
NP_001002106.1 rpl5b gene product D. rerio 91.5 295
NP_001036387.1 ribosomal protein L5, isoform A D. melanogaster 80.3 298
NP_495811.1 Protein RPL-5 C. elegans 72.0 292
NP_198790.1 60S ribosomal protein L5-2 A. thaliana 68.7 294
XP_001689859.1 ribosomal protein L5, component of cytosolic 80S ribosome and 60S large subunit C. reinhardtii 66.5 292
NP_015194.1 ribosomal 60S subunit protein L5 S. cerevisiae 62.0 296
XP_960578.1 60S ribosomal protein L5 N. crassa 61.8 300
Other hits (2 of 54) [Show all]SpeciesId(%)Len(aa)
XP_001515074.2 PREDICTED: 60S ribosomal protein L5-like O. anatinus 99.3 296
XP_001376763.2 PREDICTED: 60S ribosomal protein L5-like M. domestica 99.1 323

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; pancreas; liver; lung; testis; uterus; eye; uncharacterized tissue; stomach; kidney; skin; intestine; mixed; placenta; muscle; bone; blood; prostate; mammary gland; ovary; lymph; ascites; connective tissue; bone marrow; cervix; heart; vascular; tonsil; lymph node; spleen; umbilical cord; thyroid; pharynx; thymus; bladder; pituitary gland; salivary gland; mouth; epididymis; amniotic fluid; nerve; adipose tissue; spinal cord; larynx; trachea; adrenal gland; ear; esophagus; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p22.1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

NM_000969.3 Homo sapiens ribosomal protein L5 (RPL5), mRNA P
AB208980.1 Homo sapiens mRNA for ribosomal protein L5 variant protein P
AK222604.1 Homo sapiens mRNA for ribosomal protein L5 variant, clone: CAS05133 PA
BC109370.1 Homo sapiens ribosomal protein L5, mRNA (cDNA clone MGC:117339 IMAGE:5736022), complete cds PA
BC001882.1 Homo sapiens ribosomal protein L5, mRNA (cDNA clone IMAGE:3544216), complete cds PA
BC132970.1 Homo sapiens ribosomal protein L5, mRNA (cDNA clone MGC:164601 IMAGE:40146992), complete cds P
BC132972.1 Homo sapiens ribosomal protein L5, mRNA (cDNA clone MGC:164603 IMAGE:40146994), complete cds P
AK314720.1 Homo sapiens cDNA, FLJ95579, Homo sapiens ribosomal protein L5 (RPL5), mRNA P
AF113210.1 Homo sapiens MSTP030 mRNA, complete cds PA
BC012937.2 Homo sapiens ribosomal protein L5, mRNA (cDNA clone IMAGE:3853527) PA
U66590.1 Human ribosomal protein L5 pseudogene mRNA, partial cds P
U76609.1 Human ribosomal L5 protein mRNA, partial cds PA
U14966.1 Human ribosomal protein L5 mRNA, complete cds P

EST sequences (10 of 3548) [Show all sequences]

AA961224.1 Clone IMAGE:1569847 lung 3' read P
AA968658.1 Clone IMAGE:1592262 kidney 3' read PA
AA974800.1 Clone IMAGE:1558539 lung 3' read P
AA976301.1 Clone IMAGE:1591421 kidney 3' read PA
AA976359.1 Clone IMAGE:1591470 kidney 3' read PA
AA977316.1 Clone IMAGE:1591856 kidney 3' read
AA991189.1 Clone IMAGE:1606299 kidney 3' read PA
AA991399.1 Clone IMAGE:1608966 mammary gland 3' read A
AA991583.1 Clone IMAGE:1609733 mammary gland 3' read PA
AI002170.1 Clone IMAGE:1593114 kidney 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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