> Histone cluster 1, H3d (HIST1H3D)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:1272042     UniGene Hs.532144     Homo sapiens (human)   HIST1H3D Order cDNA clone, Links
Histone cluster 1, H3d (HIST1H3D)

Human protein-coding gene HIST1H3D. Represented by 19 ESTs from 16 cDNA libraries. Corresponds to reference sequence NM_003530.4. [UniGene 1272042 - Hs.532144]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_659539.1 Hist1h3g gene product M. musculus 100.0 135
XP_001055231.1 PREDICTED: histone cluster 1, H3f-like R. norvegicus 100.0 135
XP_001083629.1 PREDICTED: histone H3.2-like isoform 1 M. mulatta 100.0 135
XP_003897202.1 PREDICTED: histone H3.1-like P. anubis 100.0 135
XP_527254.2 PREDICTED: histone H3.1-like P. troglodytes 100.0 135
NP_066298.1 HIST1H3F gene product H. sapiens 100.0 135
XP_003434243.1 PREDICTED: histone H3.1-like C. lupus familiaris 100.0 135
XP_001496812.1 PREDICTED: histone H3.1-like E. caballus 100.0 135
XP_001927801.1 PREDICTED: histone H3.1-like S. scrofa 100.0 135
XP_002697506.1 PREDICTED: histone H3.1 B. taurus 100.0 135
XP_004019075.1 PREDICTED: histone H3.1-like O. aries 100.0 135
XP_002714239.1 PREDICTED: histone cluster 1, H3f-like O. cuniculus 100.0 135
NP_724345.1 histone H3 D. melanogaster 99.3 135
XP_001337584.1 PREDICTED: histone H3.2-like D. rerio 99.3 135
NP_001091428.1 histone H3.2 X. laevis 99.3 135
NP_189372.1 histone H3 A. thaliana 97.1 135
NP_496899.1 Protein HIS-42 C. elegans 97.1 135
XP_001690671.1 histone H3 C. reinhardtii 95.6 134
NP_009564.1 Hht1p S. cerevisiae 91.9 135
XP_956003.1 histone H3 N. crassa 91.8 135
Other hits (2 of 56) [Show all]SpeciesId(%)Len(aa)
XP_002731238.1 PREDICTED: histone cluster 2, H3c2-like S. kowalevskii 99.3 135
XP_001362266.1 PREDICTED: histone H3.2-like M. domestica 99.3 135

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; skin; ovary; lung; prostate; pharynx; placenta; cervix; spleen; blood; testis; intestine
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6p22.1
UniSTS entry: Chr 6 SGC33007 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

NM_003530.4 Homo sapiens histone cluster 1, H3d (HIST1H3D), mRNA P
BC031333.1 Homo sapiens histone cluster 1, H3d, mRNA (cDNA clone MGC:45668 IMAGE:3608479), complete cds PA

EST sequences (10 of 19) [Show all sequences]

BX106526.1 Clone IMAGp998I20590_;_IMAGE:268891 skin P
AI351370.1 Clone IMAGE:1931464 mixed 3' read P
AI399887.1 Clone IMAGE:2114004 mixed 3' read P
CD694188.1 pharynx P
AW883937.1 ovary P
BE796394.1 Clone IMAGE:3946036 lung 5' read P
BF002921.1 Clone IMAGE:3309978 prostate 3' read P
N24630.1 Clone IMAGE:268891 skin 3' read
N35832.1 Clone IMAGE:268891 skin 5' read P
T47071.1 Clone IMAGE:71013 placenta 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help